Intron retention enhances gene regulatory complexity in vertebrates.
Identifieur interne : 000931 ( Main/Exploration ); précédent : 000930; suivant : 000932Intron retention enhances gene regulatory complexity in vertebrates.
Auteurs : Ulf Schmitz [Australie] ; Natalia Pinello [Australie] ; Fangzhi Jia [Australie] ; Sultan Alasmari [Australie] ; William Ritchie [France] ; Maria-Cristina Keightley [Australie] ; Shaniko Shini [Australie] ; Graham J. Lieschke [Australie] ; Justin J-L Wong [Australie] ; John E J. Rasko [Australie]Source :
- Genome biology [ 1474-760X ] ; 2017.
Abstract
While intron retention (IR) is now widely accepted as an important mechanism of mammalian gene expression control, it remains the least studied form of alternative splicing. To delineate conserved features of IR, we performed an exhaustive phylogenetic analysis in a highly purified and functionally defined cell type comprising neutrophilic granulocytes from five vertebrate species spanning 430 million years of evolution.
DOI: 10.1186/s13059-017-1339-3
PubMed: 29141666
Affiliations:
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Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Gene & Stem Cell Therapy Program, Centenary Institute, University of Sydney, Camperdown, 2050, NSW</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Pinello, Natalia" sort="Pinello, Natalia" uniqKey="Pinello N" first="Natalia" last="Pinello">Natalia Pinello</name><affiliation wicri:level="4"><nlm:affiliation>Gene & Stem Cell Therapy Program, Centenary Institute, University of Sydney, Camperdown, 2050, NSW, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Gene & Stem Cell Therapy Program, Centenary Institute, University of Sydney, Camperdown, 2050, NSW</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement 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Institute, Monash University, Clayton, 3800, VIC, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Regenerative Medicine Institute, Monash University, Clayton, 3800, VIC</wicri:regionArea><wicri:noRegion>VIC</wicri:noRegion></affiliation></author><author><name sortKey="Ritchie, William" sort="Ritchie, William" uniqKey="Ritchie W" first="William" last="Ritchie">William Ritchie</name><affiliation wicri:level="1"><nlm:affiliation>CNRS, UMR 5203, Montpellier, 34094, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>CNRS, UMR 5203, Montpellier, 34094</wicri:regionArea><wicri:noRegion>34094</wicri:noRegion><wicri:noRegion>34094</wicri:noRegion></affiliation></author><author><name sortKey="Keightley, Maria Cristina" sort="Keightley, Maria Cristina" uniqKey="Keightley M" first="Maria-Cristina" last="Keightley">Maria-Cristina Keightley</name><affiliation wicri:level="1"><nlm:affiliation>Australian Regenerative Medicine Institute, Monash University, Clayton, 3800, VIC, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Regenerative Medicine Institute, Monash University, Clayton, 3800, VIC</wicri:regionArea><wicri:noRegion>VIC</wicri:noRegion></affiliation></author><author><name sortKey="Shini, Shaniko" sort="Shini, Shaniko" uniqKey="Shini S" first="Shaniko" last="Shini">Shaniko Shini</name><affiliation wicri:level="1"><nlm:affiliation>School of Biomedical Sciences, The University of Queensland, Brisbane, QLD, 4072, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Biomedical Sciences, The University of Queensland, Brisbane, QLD, 4072</wicri:regionArea><wicri:noRegion>4072</wicri:noRegion></affiliation></author><author><name sortKey="Lieschke, Graham J" sort="Lieschke, Graham J" uniqKey="Lieschke G" first="Graham J" last="Lieschke">Graham J. Lieschke</name><affiliation wicri:level="1"><nlm:affiliation>Australian Regenerative Medicine Institute, Monash University, Clayton, 3800, VIC, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Regenerative Medicine Institute, Monash University, Clayton, 3800, VIC</wicri:regionArea><wicri:noRegion>VIC</wicri:noRegion></affiliation></author><author><name sortKey="Wong, Justin J L" sort="Wong, Justin J L" uniqKey="Wong J" first="Justin J-L" last="Wong">Justin J-L Wong</name><affiliation wicri:level="4"><nlm:affiliation>Gene & Stem Cell Therapy Program, Centenary Institute, University of Sydney, Camperdown, 2050, NSW, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Gene & Stem Cell Therapy Program, Centenary Institute, University of Sydney, Camperdown, 2050, NSW</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Rasko, John E J" sort="Rasko, John E J" uniqKey="Rasko J" first="John E J" last="Rasko">John E J. Rasko</name><affiliation wicri:level="4"><nlm:affiliation>Gene & Stem Cell Therapy Program, Centenary Institute, University of Sydney, Camperdown, 2050, NSW, Australia. j.rasko@centenary.org.au.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Gene & Stem Cell Therapy Program, Centenary Institute, University of Sydney, Camperdown, 2050, NSW</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author></analytic><series><title level="j">Genome biology</title><idno type="eISSN">1474-760X</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">While intron retention (IR) is now widely accepted as an important mechanism of mammalian gene expression control, it remains the least studied form of alternative splicing. To delineate conserved features of IR, we performed an exhaustive phylogenetic analysis in a highly purified and functionally defined cell type comprising neutrophilic granulocytes from five vertebrate species spanning 430 million years of evolution.</div></front></TEI><affiliations><list><country><li>Australie</li><li>France</li></country><region><li>Nouvelle-Galles du Sud</li></region><settlement><li>Sydney</li></settlement><orgName><li>Université de Sydney</li></orgName></list><tree><country name="Australie"><region name="Nouvelle-Galles du Sud"><name sortKey="Schmitz, Ulf" sort="Schmitz, Ulf" uniqKey="Schmitz U" first="Ulf" last="Schmitz">Ulf Schmitz</name></region><name sortKey="Alasmari, Sultan" sort="Alasmari, Sultan" uniqKey="Alasmari S" first="Sultan" last="Alasmari">Sultan Alasmari</name><name sortKey="Jia, Fangzhi" sort="Jia, Fangzhi" uniqKey="Jia F" first="Fangzhi" last="Jia">Fangzhi Jia</name><name sortKey="Keightley, Maria Cristina" sort="Keightley, Maria Cristina" uniqKey="Keightley M" first="Maria-Cristina" last="Keightley">Maria-Cristina Keightley</name><name sortKey="Lieschke, Graham J" sort="Lieschke, Graham J" uniqKey="Lieschke G" first="Graham J" last="Lieschke">Graham J. Lieschke</name><name sortKey="Pinello, Natalia" sort="Pinello, Natalia" uniqKey="Pinello N" first="Natalia" last="Pinello">Natalia Pinello</name><name sortKey="Rasko, John E J" sort="Rasko, John E J" uniqKey="Rasko J" first="John E J" last="Rasko">John E J. Rasko</name><name sortKey="Shini, Shaniko" sort="Shini, Shaniko" uniqKey="Shini S" first="Shaniko" last="Shini">Shaniko Shini</name><name sortKey="Wong, Justin J L" sort="Wong, Justin J L" uniqKey="Wong J" first="Justin J-L" last="Wong">Justin J-L Wong</name></country><country name="France"><noRegion><name sortKey="Ritchie, William" sort="Ritchie, William" uniqKey="Ritchie W" first="William" last="Ritchie">William Ritchie</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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