Serveur d'exploration sur les relations entre la France et l'Australie

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals.

Identifieur interne : 000141 ( Main/Exploration ); précédent : 000140; suivant : 000142

Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals.

Auteurs : Inge Kühl [Allemagne] ; Maria Miranda [Allemagne] ; Ilian Atanassov [Allemagne] ; Irina Kuznetsova [Australie] ; Yvonne Hinze [Allemagne] ; Arnaud Mourier [France] ; Aleksandra Filipovska [Australie] ; Nils-Göran Larsson [Allemagne]

Source :

RBID : pubmed:29132502

Abstract

Dysfunction of the oxidative phosphorylation (OXPHOS) system is a major cause of human disease and the cellular consequences are highly complex. Here, we present comparative analyses of mitochondrial proteomes, cellular transcriptomes and targeted metabolomics of five knockout mouse strains deficient in essential factors required for mitochondrial DNA gene expression, leading to OXPHOS dysfunction. Moreover, we describe sequential protein changes during post-natal development and progressive OXPHOS dysfunction in time course analyses in control mice and a middle lifespan knockout, respectively. Very unexpectedly, we identify a new response pathway to OXPHOS dysfunction in which the intra-mitochondrial synthesis of coenzyme Q (ubiquinone, Q) and Q levels are profoundly decreased, pointing towards novel possibilities for therapy. Our extensive omics analyses provide a high-quality resource of altered gene expression patterns under severe OXPHOS deficiency comparing several mouse models, that will deepen our understanding, open avenues for research and provide an important reference for diagnosis and treatment.

DOI: 10.7554/eLife.30952
PubMed: 29132502


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals.</title>
<author>
<name sortKey="Kuhl, Inge" sort="Kuhl, Inge" uniqKey="Kuhl I" first="Inge" last="Kühl">Inge Kühl</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Miranda, Maria" sort="Miranda, Maria" uniqKey="Miranda M" first="Maria" last="Miranda">Maria Miranda</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Atanassov, Ilian" sort="Atanassov, Ilian" uniqKey="Atanassov I" first="Ilian" last="Atanassov">Ilian Atanassov</name>
<affiliation wicri:level="1">
<nlm:affiliation>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Kuznetsova, Irina" sort="Kuznetsova, Irina" uniqKey="Kuznetsova I" first="Irina" last="Kuznetsova">Irina Kuznetsova</name>
<affiliation wicri:level="1">
<nlm:affiliation>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands</wicri:regionArea>
<wicri:noRegion>Nedlands</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Hinze, Yvonne" sort="Hinze, Yvonne" uniqKey="Hinze Y" first="Yvonne" last="Hinze">Yvonne Hinze</name>
<affiliation wicri:level="1">
<nlm:affiliation>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Mourier, Arnaud" sort="Mourier, Arnaud" uniqKey="Mourier A" first="Arnaud" last="Mourier">Arnaud Mourier</name>
<affiliation wicri:level="4">
<nlm:affiliation>Université de Bordeaux, Bordeaux, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>Université de Bordeaux, Bordeaux</wicri:regionArea>
<placeName>
<region type="region">Nouvelle-Aquitaine</region>
<region type="old region">Aquitaine</region>
<settlement type="city">Bordeaux</settlement>
<settlement type="city">Bordeaux</settlement>
</placeName>
<orgName type="university">Université de Bordeaux</orgName>
</affiliation>
</author>
<author>
<name sortKey="Filipovska, Aleksandra" sort="Filipovska, Aleksandra" uniqKey="Filipovska A" first="Aleksandra" last="Filipovska">Aleksandra Filipovska</name>
<affiliation wicri:level="1">
<nlm:affiliation>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands</wicri:regionArea>
<wicri:noRegion>Nedlands</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Larsson, Nils Goran" sort="Larsson, Nils Goran" uniqKey="Larsson N" first="Nils-Göran" last="Larsson">Nils-Göran Larsson</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2017">2017</date>
<idno type="RBID">pubmed:29132502</idno>
<idno type="pmid">29132502</idno>
<idno type="doi">10.7554/eLife.30952</idno>
<idno type="wicri:Area/PubMed/Corpus">000131</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000131</idno>
<idno type="wicri:Area/PubMed/Curation">000131</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000131</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000131</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000131</idno>
<idno type="wicri:Area/Ncbi/Merge">005208</idno>
<idno type="wicri:Area/Ncbi/Curation">005208</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">005208</idno>
<idno type="wicri:Area/Main/Merge">000136</idno>
<idno type="wicri:Area/Main/Curation">000141</idno>
<idno type="wicri:Area/Main/Exploration">000141</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals.</title>
<author>
<name sortKey="Kuhl, Inge" sort="Kuhl, Inge" uniqKey="Kuhl I" first="Inge" last="Kühl">Inge Kühl</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Miranda, Maria" sort="Miranda, Maria" uniqKey="Miranda M" first="Maria" last="Miranda">Maria Miranda</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Atanassov, Ilian" sort="Atanassov, Ilian" uniqKey="Atanassov I" first="Ilian" last="Atanassov">Ilian Atanassov</name>
<affiliation wicri:level="1">
<nlm:affiliation>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Kuznetsova, Irina" sort="Kuznetsova, Irina" uniqKey="Kuznetsova I" first="Irina" last="Kuznetsova">Irina Kuznetsova</name>
<affiliation wicri:level="1">
<nlm:affiliation>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands</wicri:regionArea>
<wicri:noRegion>Nedlands</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Hinze, Yvonne" sort="Hinze, Yvonne" uniqKey="Hinze Y" first="Yvonne" last="Hinze">Yvonne Hinze</name>
<affiliation wicri:level="1">
<nlm:affiliation>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Proteomics Core Facility, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Mourier, Arnaud" sort="Mourier, Arnaud" uniqKey="Mourier A" first="Arnaud" last="Mourier">Arnaud Mourier</name>
<affiliation wicri:level="4">
<nlm:affiliation>Université de Bordeaux, Bordeaux, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>Université de Bordeaux, Bordeaux</wicri:regionArea>
<placeName>
<region type="region">Nouvelle-Aquitaine</region>
<region type="old region">Aquitaine</region>
<settlement type="city">Bordeaux</settlement>
<settlement type="city">Bordeaux</settlement>
</placeName>
<orgName type="university">Université de Bordeaux</orgName>
</affiliation>
</author>
<author>
<name sortKey="Filipovska, Aleksandra" sort="Filipovska, Aleksandra" uniqKey="Filipovska A" first="Aleksandra" last="Filipovska">Aleksandra Filipovska</name>
<affiliation wicri:level="1">
<nlm:affiliation>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>Harry Perkins Institute of Medical Research, The University of Western Australia, Nedlands</wicri:regionArea>
<wicri:noRegion>Nedlands</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Larsson, Nils Goran" sort="Larsson, Nils Goran" uniqKey="Larsson N" first="Nils-Göran" last="Larsson">Nils-Göran Larsson</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">eLife</title>
<idno type="eISSN">2050-084X</idno>
<imprint>
<date when="2017" type="published">2017</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Dysfunction of the oxidative phosphorylation (OXPHOS) system is a major cause of human disease and the cellular consequences are highly complex. Here, we present comparative analyses of mitochondrial proteomes, cellular transcriptomes and targeted metabolomics of five knockout mouse strains deficient in essential factors required for mitochondrial DNA gene expression, leading to OXPHOS dysfunction. Moreover, we describe sequential protein changes during post-natal development and progressive OXPHOS dysfunction in time course analyses in control mice and a middle lifespan knockout, respectively. Very unexpectedly, we identify a new response pathway to OXPHOS dysfunction in which the intra-mitochondrial synthesis of coenzyme Q (ubiquinone, Q) and Q levels are profoundly decreased, pointing towards novel possibilities for therapy. Our extensive omics analyses provide a high-quality resource of altered gene expression patterns under severe OXPHOS deficiency comparing several mouse models, that will deepen our understanding, open avenues for research and provide an important reference for diagnosis and treatment.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Allemagne</li>
<li>Australie</li>
<li>France</li>
</country>
<region>
<li>Aquitaine</li>
<li>Nouvelle-Aquitaine</li>
</region>
<settlement>
<li>Bordeaux</li>
</settlement>
<orgName>
<li>Université de Bordeaux</li>
</orgName>
</list>
<tree>
<country name="Allemagne">
<noRegion>
<name sortKey="Kuhl, Inge" sort="Kuhl, Inge" uniqKey="Kuhl I" first="Inge" last="Kühl">Inge Kühl</name>
</noRegion>
<name sortKey="Atanassov, Ilian" sort="Atanassov, Ilian" uniqKey="Atanassov I" first="Ilian" last="Atanassov">Ilian Atanassov</name>
<name sortKey="Hinze, Yvonne" sort="Hinze, Yvonne" uniqKey="Hinze Y" first="Yvonne" last="Hinze">Yvonne Hinze</name>
<name sortKey="Larsson, Nils Goran" sort="Larsson, Nils Goran" uniqKey="Larsson N" first="Nils-Göran" last="Larsson">Nils-Göran Larsson</name>
<name sortKey="Miranda, Maria" sort="Miranda, Maria" uniqKey="Miranda M" first="Maria" last="Miranda">Maria Miranda</name>
</country>
<country name="Australie">
<noRegion>
<name sortKey="Kuznetsova, Irina" sort="Kuznetsova, Irina" uniqKey="Kuznetsova I" first="Irina" last="Kuznetsova">Irina Kuznetsova</name>
</noRegion>
<name sortKey="Filipovska, Aleksandra" sort="Filipovska, Aleksandra" uniqKey="Filipovska A" first="Aleksandra" last="Filipovska">Aleksandra Filipovska</name>
</country>
<country name="France">
<region name="Nouvelle-Aquitaine">
<name sortKey="Mourier, Arnaud" sort="Mourier, Arnaud" uniqKey="Mourier A" first="Arnaud" last="Mourier">Arnaud Mourier</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Asie/explor/AustralieFrV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000141 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000141 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Asie
   |area=    AustralieFrV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:29132502
   |texte=   Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:29132502" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a AustralieFrV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Dec 5 10:43:12 2017. Site generation: Tue Mar 5 14:07:20 2024