AustralieFrV1, Main, Curation, bibRecord, 00CE71

Comparative Linkage Mapping of Human Chromosome 13 and Bovine Chromosome 12

Identifieur interne : 00CE71 ( Main/Curation ); précédent : 00CE70; suivant : 00CE72

Comparative Linkage Mapping of Human Chromosome 13 and Bovine Chromosome 12

Auteurs : H. S. Sun ; L. Cai ; S. K. Davis ; J. F. Taylor ; L. K. Doud ; M. D. Bishop ; H. Hayes [France] ; W. Barendse [Australie] ; D. Vaiman [France] ; R. A. Mcgraw ; T. Hirano [Japon] ; Y. Sugimoto [Japon] ; B. W. Kirkpatrick

Source :

Genomics [ 0888-7543 ] ; 1997.

RBID : ISTEX:449D65517AF736073F97D088749C0CDFEC2C6A56

Descripteurs français

Pascal (Inist)
- Bovin, Carte génétique, Chromosome 12, Chromosome D13, Groupe linkage, Homme, Marqueur génétique, Polymorphisme.
Wicri :
- topic : Bovin, Homme.

English descriptors

Abstract

Abstract: A comparative linkage map of human chromosome 13 and bovine chromosome 12 was constructed using eight polymorphic microsatellite markers associated with six specific genes. Linkage of these was also examined relative to five previously mapped anonymous microsatellite markers. Seven gene-linked markers were developed from bovine large-insert genomic clones containing one of five genes of interest (serotonin receptor subtype 2, fms-related tyrosine kinase, coagulation factor 10, retinoblastoma susceptibility gene, collagen type IV alpha 1), and one additional marker was developed from a microsatellite resident within an intron of the bovine dopachrome tautomerase gene. Four of these loci were previously assigned to bovine chromosome 12 by analysis of a somatic cell hybrid panel. This study provides linkage information for examining gene order in this conserved synteny group. The comparative linkage mapping results indicate that the q arm of human chromosome 13 is almost entirely conserved in bovine chromosome 12. One intrachromosomal rearrangement was detected in this linkage group relative to human, and this rearrangement was confirmed by fluorescencein situhybridization results.

Url:

https://api.istex.fr/document/449D65517AF736073F97D088749C0CDFEC2C6A56/fulltext/pdf

DOI: 10.1006/geno.1996.4481

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H. S. Sun

<affiliation><wicri:noCountry code="subField">53706</wicri:noCountry>
</affiliation>

L. Cai

<affiliation><wicri:noCountry code="subField">77843</wicri:noCountry>
</affiliation>

S. K. Davis

<affiliation><wicri:noCountry code="subField">77843</wicri:noCountry>
</affiliation>

J. F. Taylor

<affiliation><wicri:noCountry code="subField">77843</wicri:noCountry>
</affiliation>

L. K. Doud

<affiliation><wicri:noCountry code="subField">53532</wicri:noCountry>
</affiliation>

M. D. Bishop

<affiliation><wicri:noCountry code="subField">53532</wicri:noCountry>
</affiliation>

R. A. Mcgraw

<affiliation><wicri:noCountry code="subField">30601</wicri:noCountry>
</affiliation>

B. W. Kirkpatrick

<affiliation><wicri:noCountry code="subField">53706</wicri:noCountry>
</affiliation>

Le document en format XML

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<term>Human chromosome</term>
<term>Human genome</term>
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<term>Linkage analysis</term>
<term>Linkage group</term>
<term>Linkage information</term>
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<term>Marker</term>
<term>Marker development</term>
<term>Microsatellite</term>
<term>Microsatellite markers</term>
<term>Microsatellites</term>
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<term>Recombination frequencies</term>
<term>Recombination frequency</term>
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<front><div type="abstract" xml:lang="en">Abstract: A comparative linkage map of human chromosome 13 and bovine chromosome 12 was constructed using eight polymorphic microsatellite markers associated with six specific genes. Linkage of these was also examined relative to five previously mapped anonymous microsatellite markers. Seven gene-linked markers were developed from bovine large-insert genomic clones containing one of five genes of interest (serotonin receptor subtype 2, fms-related tyrosine kinase, coagulation factor 10, retinoblastoma susceptibility gene, collagen type IV alpha 1), and one additional marker was developed from a microsatellite resident within an intron of the bovine dopachrome tautomerase gene. Four of these loci were previously assigned to bovine chromosome 12 by analysis of a somatic cell hybrid panel. This study provides linkage information for examining gene order in this conserved synteny group. The comparative linkage mapping results indicate that the q arm of human chromosome 13 is almost entirely conserved in bovine chromosome 12. One intrachromosomal rearrangement was detected in this linkage group relative to human, and this rearrangement was confirmed by fluorescencein situhybridization results.</div>
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</inist:fA14>
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<s2>Madison, Wisconsin 53706</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
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</inist:fA14>
<country>États-Unis</country>
<wicri:noRegion>Madison, Wisconsin 53706</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Cai, L" sort="Cai, L" uniqKey="Cai L" first="L." last="Cai">L. Cai</name>
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<s2>College Station, Texas 77843</s2>
<s3>USA</s3>
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</affiliation>
</author>
<author><name sortKey="Davis, S K" sort="Davis, S K" uniqKey="Davis S" first="S. K." last="Davis">S. K. Davis</name>
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<s2>College Station, Texas 77843</s2>
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</inist:fA14>
<country>États-Unis</country>
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</affiliation>
</author>
<author><name sortKey="Taylor, J F" sort="Taylor, J F" uniqKey="Taylor J" first="J. F." last="Taylor">J. F. Taylor</name>
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<s2>College Station, Texas 77843</s2>
<s3>USA</s3>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<wicri:noRegion>College Station, Texas 77843</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Doud, L K" sort="Doud, L K" uniqKey="Doud L" first="L. K." last="Doud">L. K. Doud</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>ABS Global Inc.</s1>
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<s3>USA</s3>
<sZ>5 aut.</sZ>
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</inist:fA14>
<country>États-Unis</country>
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</affiliation>
</author>
<author><name sortKey="Bishop, M D" sort="Bishop, M D" uniqKey="Bishop M" first="M. D." last="Bishop">M. D. Bishop</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>ABS Global Inc.</s1>
<s2>DeForest, Wisconsin 53532</s2>
<s3>USA</s3>
<sZ>5 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<wicri:noRegion>ABS Global Inc.</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Hayes, H" sort="Hayes, H" uniqKey="Hayes H" first="H." last="Hayes">H. Hayes</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>INRA, Laboratoire de Genetique Biochimique et de Cytogenetique</s1>
<s2>Jouy-en-Josas</s2>
<s3>FRA</s3>
<sZ>7 aut.</sZ>
<sZ>9 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
<wicri:noRegion>Laboratoire de Genetique Biochimique et de Cytogenetique</wicri:noRegion>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Barendse, W" sort="Barendse, W" uniqKey="Barendse W" first="W." last="Barendse">W. Barendse</name>
<affiliation wicri:level="1"><inist:fA14 i1="05"><s1>CSIRO, Division of Tropical Animal Production, University of Queensland</s1>
<s2>Queensland 4072</s2>
<s3>AUS</s3>
<sZ>8 aut.</sZ>
</inist:fA14>
<country>Australie</country>
<wicri:noRegion>Queensland 4072</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Vaiman, D" sort="Vaiman, D" uniqKey="Vaiman D" first="D." last="Vaiman">D. Vaiman</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>INRA, Laboratoire de Genetique Biochimique et de Cytogenetique</s1>
<s2>Jouy-en-Josas</s2>
<s3>FRA</s3>
<sZ>7 aut.</sZ>
<sZ>9 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
<wicri:noRegion>Laboratoire de Genetique Biochimique et de Cytogenetique</wicri:noRegion>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Mcgraw, R A" sort="Mcgraw, R A" uniqKey="Mcgraw R" first="R. A." last="Mcgraw">R. A. Mcgraw</name>
<affiliation wicri:level="1"><inist:fA14 i1="06"><s1>College of Veterinary Medicine, University of Georgia</s1>
<s2>Athens, Georgia 30601</s2>
<s3>USA</s3>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<wicri:noRegion>Athens, Georgia 30601</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Hirano, T" sort="Hirano, T" uniqKey="Hirano T" first="T." last="Hirano">T. Hirano</name>
<affiliation wicri:level="1"><inist:fA14 i1="07"><s1>Shirakawa Institute of Animal Genetics</s1>
<s2>Fukushima</s2>
<s3>JPN</s3>
<sZ>11 aut.</sZ>
<sZ>12 aut.</sZ>
</inist:fA14>
<country>Japon</country>
<wicri:noRegion>Shirakawa Institute of Animal Genetics</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Sugimoto, Y" sort="Sugimoto, Y" uniqKey="Sugimoto Y" first="Y." last="Sugimoto">Y. Sugimoto</name>
<affiliation wicri:level="1"><inist:fA14 i1="07"><s1>Shirakawa Institute of Animal Genetics</s1>
<s2>Fukushima</s2>
<s3>JPN</s3>
<sZ>11 aut.</sZ>
<sZ>12 aut.</sZ>
</inist:fA14>
<country>Japon</country>
<wicri:noRegion>Shirakawa Institute of Animal Genetics</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kirkpatrick, B W" sort="Kirkpatrick, B W" uniqKey="Kirkpatrick B" first="B. W." last="Kirkpatrick">B. W. Kirkpatrick</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department of Animal Sciences, University of Wisconsin</s1>
<s2>Madison, Wisconsin 53706</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>13 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<wicri:noRegion>Madison, Wisconsin 53706</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j" type="main">Genomics : (San Diego, CA)</title>
<title level="j" type="abbreviated">Genomics : (S. Diego CA)</title>
<idno type="ISSN">0888-7543</idno>
<imprint><date when="1997">1997</date>
</imprint>
</series>
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<seriesStmt><title level="j" type="main">Genomics : (San Diego, CA)</title>
<title level="j" type="abbreviated">Genomics : (S. Diego CA)</title>
<idno type="ISSN">0888-7543</idno>
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</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bovine</term>
<term>Chromosome 12</term>
<term>Chromosome D13</term>
<term>Genetic mapping</term>
<term>Genetic marker</term>
<term>Human</term>
<term>Linkage group</term>
<term>Polymorphism</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Bovin</term>
<term>Homme</term>
<term>Chromosome D13</term>
<term>Chromosome 12</term>
<term>Groupe linkage</term>
<term>Carte génétique</term>
<term>Marqueur génétique</term>
<term>Polymorphisme</term>
</keywords>
<keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Bovin</term>
<term>Homme</term>
</keywords>
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<front><div type="abstract" xml:lang="en">A comparative linkage map of human chromosome 13 and bovine chromosome 12 was constructed using eight polymorphic microsatellite markers associated with six specific genes. Linkage of these was also examined relative to five previously mapped anonymous microsatellite markers. Seven gene-linked markers were developed from bovine large-insert genomic clones containing one of five genes of interest (serotonin receptor subtype 2, fms-related tyrosine kinase, coagulation factor 10, retinoblastima susceptibility gens, collagen type IV alpha 1), and one additional marker was developed from a microsatellite resident within an intron of the bovine dopachrome tautomerase gene. Chromosome 12 by analysis of a somatic cell hybrid panel. This study provides linkage information for examining gene order in this conserved syntheny group. The comparative linkage mapping results indicate that the q arm of human chromosome 13 is almost entirely conserved in bovine chromosome 13 is almost entirely conserved in bovine chromosome 12. One intrachromosomal rearrangement was detected in this linkage group relative to human, and this rearrangement was confirmed by fluorescence in situ hybridization results.</div>
</front>
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<author><name sortKey="Cai, L" sort="Cai, L" uniqKey="Cai L" first="L." last="Cai">L. Cai</name>
</author>
<author><name sortKey="Davis, S K" sort="Davis, S K" uniqKey="Davis S" first="S. K." last="Davis">S. K. Davis</name>
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<author><name sortKey="Taylor, J F" sort="Taylor, J F" uniqKey="Taylor J" first="J. F." last="Taylor">J. F. Taylor</name>
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<author><name sortKey="Doud, L K" sort="Doud, L K" uniqKey="Doud L" first="L. K." last="Doud">L. K. Doud</name>
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<author><name sortKey="Bishop, M D" sort="Bishop, M D" uniqKey="Bishop M" first="M. D." last="Bishop">M. D. Bishop</name>
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</affiliation>
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<author><name sortKey="Doud, L K" sort="Doud, L K" uniqKey="Doud L" first="L. K." last="Doud">L. K. Doud</name>
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</affiliation>
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<wicri:regionArea>INRA, Laboratoire de Genetique Biochimique et de Cytogenetique, Jouy-en-Josas</wicri:regionArea>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
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</author>
<author><name sortKey="Barendse, W" sort="Barendse, W" uniqKey="Barendse W" first="W." last="Barendse">W. Barendse</name>
<affiliation wicri:level="1"><country xml:lang="fr">Australie</country>
<wicri:regionArea>CSIRO, Division of Tropical Animal Production, University of Queensland, Queensland, 4072</wicri:regionArea>
<wicri:noRegion>4072</wicri:noRegion>
</affiliation>
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<author><name sortKey="Vaiman, D" sort="Vaiman, D" uniqKey="Vaiman D" first="D." last="Vaiman">D. Vaiman</name>
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<wicri:regionArea>INRA, Laboratoire de Genetique Biochimique et de Cytogenetique, Jouy-en-Josas</wicri:regionArea>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
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</author>
<author><name sortKey="Mcgraw, R A" sort="Mcgraw, R A" uniqKey="Mcgraw R" first="R. A." last="Mcgraw">R. A. Mcgraw</name>
<affiliation><wicri:noCountry code="subField">30601</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Hirano, T" sort="Hirano, T" uniqKey="Hirano T" first="T." last="Hirano">T. Hirano</name>
<affiliation wicri:level="1"><country xml:lang="fr">Japon</country>
<wicri:regionArea>Shirakawa Institute of Animal Genetics, Fukushima</wicri:regionArea>
<wicri:noRegion>Fukushima</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Sugimoto, Y" sort="Sugimoto, Y" uniqKey="Sugimoto Y" first="Y." last="Sugimoto">Y. Sugimoto</name>
<affiliation wicri:level="1"><country xml:lang="fr">Japon</country>
<wicri:regionArea>Shirakawa Institute of Animal Genetics, Fukushima</wicri:regionArea>
<wicri:noRegion>Fukushima</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kirkpatrick, B W" sort="Kirkpatrick, B W" uniqKey="Kirkpatrick B" first="B. W." last="Kirkpatrick">B. W. Kirkpatrick</name>
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<series><title level="j">Genomics</title>
<title level="j" type="abbrev">YGENO</title>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Barendse</term>
<term>Bovine</term>
<term>Bovine chromosome</term>
<term>Bovine linkage</term>
<term>Cell genet</term>
<term>Chromosomal</term>
<term>Chromosome</term>
<term>Clone</term>
<term>Comparative gene mapping</term>
<term>Comparative linkage</term>
<term>Comparative linkage mapping</term>
<term>Female rate</term>
<term>Flt1</term>
<term>Gene</term>
<term>Gene order</term>
<term>Genet</term>
<term>Genetic linkage</term>
<term>Genetics computer group</term>
<term>Geno</term>
<term>Genome</term>
<term>Genomics</term>
<term>Gnma</term>
<term>Htr2a</term>
<term>Human chromosome</term>
<term>Human genome</term>
<term>Linkage</term>
<term>Linkage analysis</term>
<term>Linkage information</term>
<term>Locus</term>
<term>Marker</term>
<term>Marker development</term>
<term>Microsatellite</term>
<term>Microsatellite markers</term>
<term>Microsatellites</term>
<term>Primer</term>
<term>Rearrangement</term>
<term>Recombination</term>
<term>Recombination frequencies</term>
<term>Recombination frequency</term>
<term>Retinoblastoma susceptibility gene</term>
<term>Sequence information</term>
<term>Syntenic</term>
<term>Synteny group</term>
<term>Tyrosine kinase</term>
<term>Womack</term>
</keywords>
<keywords scheme="Teeft" xml:lang="en"><term>Barendse</term>
<term>Bovine</term>
<term>Bovine chromosome</term>
<term>Bovine linkage</term>
<term>Cell genet</term>
<term>Chromosomal</term>
<term>Chromosome</term>
<term>Clone</term>
<term>Comparative gene mapping</term>
<term>Comparative linkage</term>
<term>Comparative linkage mapping</term>
<term>Female rate</term>
<term>Flt1</term>
<term>Gene</term>
<term>Gene order</term>
<term>Genet</term>
<term>Genetic linkage</term>
<term>Genetics computer group</term>
<term>Geno</term>
<term>Genome</term>
<term>Genomics</term>
<term>Gnma</term>
<term>Htr2a</term>
<term>Human chromosome</term>
<term>Human genome</term>
<term>Linkage</term>
<term>Linkage analysis</term>
<term>Linkage information</term>
<term>Locus</term>
<term>Marker</term>
<term>Marker development</term>
<term>Microsatellite</term>
<term>Microsatellite markers</term>
<term>Microsatellites</term>
<term>Primer</term>
<term>Rearrangement</term>
<term>Recombination</term>
<term>Recombination frequencies</term>
<term>Recombination frequency</term>
<term>Retinoblastoma susceptibility gene</term>
<term>Sequence information</term>
<term>Syntenic</term>
<term>Synteny group</term>
<term>Tyrosine kinase</term>
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<langUsage><language ident="en">en</language>
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<front><div type="abstract" xml:lang="en">Abstract: A comparative linkage map of human chromosome 13 and bovine chromosome 12 was constructed using eight polymorphic microsatellite markers associated with six specific genes. Linkage of these was also examined relative to five previously mapped anonymous microsatellite markers. Seven gene-linked markers were developed from bovine large-insert genomic clones containing one of five genes of interest (serotonin receptor subtype 2, fms-related tyrosine kinase, coagulation factor 10, retinoblastoma susceptibility gene, collagen type IV alpha 1), and one additional marker was developed from a microsatellite resident within an intron of the bovine dopachrome tautomerase gene. Four of these loci were previously assigned to bovine chromosome 12 by analysis of a somatic cell hybrid panel. This study provides linkage information for examining gene order in this conserved synteny group. The comparative linkage mapping results indicate that the q arm of human chromosome 13 is almost entirely conserved in bovine chromosome 12. One intrachromosomal rearrangement was detected in this linkage group relative to human, and this rearrangement was confirmed by fluorescencein situhybridization results.</div>
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Comparative Linkage Mapping of Human Chromosome 13 and Bovine Chromosome 12

Comparative Linkage Mapping of Human Chromosome 13 and Bovine Chromosome 12

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