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A physiological analogy of the niche for projecting the potential distribution of plants

Identifieur interne : 005734 ( Main/Curation ); précédent : 005733; suivant : 005735

A physiological analogy of the niche for projecting the potential distribution of plants

Auteurs : Steven I. Higgins [Allemagne] ; Robert B. O Ara [Allemagne] ; Olga Bykova [Canada] ; Michael D. Cramer [Afrique du Sud] ; Isabelle Chuine [France] ; Eva-Maria Gerstner [Allemagne] ; Thomas Hickler [Allemagne] ; Xavier Morin [France, Suisse] ; Michael R. Kearney [Australie] ; Guy F. Midgley [Afrique du Sud] ; Simon Scheiter [Allemagne]

Source :

RBID : ISTEX:AAB43F2A942AF43186153E1F52FF3A4C6458167D

Descripteurs français

English descriptors

Abstract

Aim  To develop a physiologically based model of the plant niche for use in species distribution modelling.

Url:
DOI: 10.1111/j.1365-2699.2012.02752.x

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ISTEX:AAB43F2A942AF43186153E1F52FF3A4C6458167D

Le document en format XML

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<term>Biomass</term>
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<term>Climate research centre</term>
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<term>Correlative methods</term>
<term>Correlative models</term>
<term>Default parameter values</term>
<term>Demographic range models</term>
<term>Differential evolution</term>
<term>Dispersal</term>
<term>Dispersal limitation</term>
<term>Distribution data</term>
<term>Distribution models</term>
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<term>Ecology</term>
<term>Ecology letters</term>
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<term>Envelope</term>
<term>Environmental</term>
<term>Environmental conditions</term>
<term>Environmental dependencies</term>
<term>Environmental factors</term>
<term>Environmental productivity index</term>
<term>Environmental variables</term>
<term>Europe</term>
<term>European tree species</term>
<term>Fagus sylvatica</term>
<term>False negatives</term>
<term>False positives</term>
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<term>Functional relationships</term>
<term>Global ecology</term>
<term>Global optimization</term>
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<term>Growth rates</term>
<term>Growth respiration</term>
<term>Guisan zimmermann</term>
<term>Hartig</term>
<term>Higgins</term>
<term>High temperatures</term>
<term>Higher education</term>
<term>Importance sampling</term>
<term>Indirect method</term>
<term>Indirect parameterization</term>
<term>Information content</term>
<term>Informative priors</term>
<term>Inventory data</term>
<term>Koeble seufert</term>
<term>Korner</term>
<term>Land management</term>
<term>Large sets</term>
<term>Leaf temperature</term>
<term>Local abundance</term>
<term>Loewe programme</term>
<term>Maintenance respiration</term>
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<term>Mechanistic models</term>
<term>Model parameters</term>
<term>Model performance</term>
<term>Model structure</term>
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<term>Monthly time step</term>
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<term>Niche construction</term>
<term>Niche dimensions</term>
<term>Nitrogen</term>
<term>Nitrogen concentration</term>
<term>Nitrogen uptake</term>
<term>Nitrogen uptake rate</term>
<term>Northern spain</term>
<term>Northern species</term>
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<term>Parameter estimates</term>
<term>Parameterization</term>
<term>Patchy distributions</term>
<term>Phenomenological functions</term>
<term>Photosynthesis</term>
<term>Photosynthetic</term>
<term>Photosynthetic performance</term>
<term>Photosynthetic rate</term>
<term>Physiological analogy</term>
<term>Physiological basis</term>
<term>Physiological factors</term>
<term>Physiological models</term>
<term>Physiological niche dimensions</term>
<term>Physiological performance</term>
<term>Physiological processes</term>
<term>Physiological rates</term>
<term>Physiological tolerances</term>
<term>Physische geographie</term>
<term>Picea</term>
<term>Picea sitchensis</term>
<term>Pinus</term>
<term>Pinus nigra</term>
<term>Plant cell</term>
<term>Plant distribution</term>
<term>Plant growth</term>
<term>Plant mass</term>
<term>Plant niche</term>
<term>Plant performance</term>
<term>Plant physiology</term>
<term>Plant size</term>
<term>Plant species</term>
<term>Populus</term>
<term>Populus tremula</term>
<term>Positive rate</term>
<term>Positive rates</term>
<term>Potential biomass</term>
<term>Potential distribution</term>
<term>Prediction errors</term>
<term>Pubescens</term>
<term>Quercus</term>
<term>Quercus species</term>
<term>Range boundaries</term>
<term>Relative abundance</term>
<term>Respiration</term>
<term>Respiration rate</term>
<term>Response functions</term>
<term>Root growth</term>
<term>Schurr</term>
<term>Sensitivity resistance</term>
<term>Sitchensis</term>
<term>Soil moisture</term>
<term>Soil nitrogen</term>
<term>Soil temperature</term>
<term>Soil water availability</term>
<term>Solar radiation</term>
<term>Spatial distribution</term>
<term>Special issue</term>
<term>Species distribution data</term>
<term>Species distribution model</term>
<term>Species distribution modelling</term>
<term>Species distribution models</term>
<term>Species distributions</term>
<term>State variables</term>
<term>Statistical method</term>
<term>Stomatal conductance</term>
<term>Study species</term>
<term>Such models</term>
<term>Supply rates</term>
<term>Sutherst</term>
<term>Sylvatica</term>
<term>Target distribution</term>
<term>Temperature response</term>
<term>Temperature response function</term>
<term>Thornley</term>
<term>Thornley transport resistance</term>
<term>Tmax</term>
<term>Tmean</term>
<term>Tmin</term>
<term>Transport</term>
<term>Tree</term>
<term>Tree species</term>
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<term>True positives</term>
<term>Tted</term>
<term>Tted models</term>
<term>Tting process</term>
<term>Uptake</term>
<term>Uptake rates</term>
<term>Water availability</term>
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<keywords scheme="Pascal" xml:lang="fr">
<term>Aire de distribution</term>
<term>Arbre</term>
<term>Biogéographie</term>
<term>Climat</term>
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<term>Europe</term>
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<term>Agriculture ecosystems</term>
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<term>Biomass</term>
<term>Biomass growth</term>
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<term>Cambridge university press</term>
<term>Cape town</term>
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<term>Carbon uptake</term>
<term>Climate research centre</term>
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<term>Correlative methods</term>
<term>Correlative models</term>
<term>Default parameter values</term>
<term>Demographic range models</term>
<term>Differential evolution</term>
<term>Dispersal</term>
<term>Dispersal limitation</term>
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<term>Distribution models</term>
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<term>Distributional data</term>
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<term>Ecological modelling</term>
<term>Ecological niche</term>
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<term>Ecology letters</term>
<term>Ecophysiological processes</term>
<term>Empirical work</term>
<term>Environmental</term>
<term>Environmental conditions</term>
<term>Environmental dependencies</term>
<term>Environmental factors</term>
<term>Environmental productivity index</term>
<term>Environmental variables</term>
<term>European tree species</term>
<term>Fagus sylvatica</term>
<term>False negatives</term>
<term>False positives</term>
<term>Functional ecology</term>
<term>Functional relationships</term>
<term>Global ecology</term>
<term>Global optimization</term>
<term>Goethe universitat frankfurt</term>
<term>Gross photosynthetic rate</term>
<term>Growth rate</term>
<term>Growth rates</term>
<term>Growth respiration</term>
<term>Guisan zimmermann</term>
<term>Hartig</term>
<term>Higgins</term>
<term>High temperatures</term>
<term>Higher education</term>
<term>Importance sampling</term>
<term>Indirect parameterization</term>
<term>Information content</term>
<term>Informative priors</term>
<term>Inventory data</term>
<term>Koeble seufert</term>
<term>Korner</term>
<term>Land management</term>
<term>Large sets</term>
<term>Leaf temperature</term>
<term>Local abundance</term>
<term>Loewe programme</term>
<term>Maintenance respiration</term>
<term>Major contributions</term>
<term>Mechanistic models</term>
<term>Model parameters</term>
<term>Model performance</term>
<term>Model structure</term>
<term>Modelling</term>
<term>Monthly estimates</term>
<term>Monthly time step</term>
<term>Niche</term>
<term>Niche construction</term>
<term>Niche dimensions</term>
<term>Nitrogen</term>
<term>Nitrogen concentration</term>
<term>Nitrogen uptake</term>
<term>Nitrogen uptake rate</term>
<term>Northern spain</term>
<term>Northern species</term>
<term>Nsoil</term>
<term>Nutrient uptake</term>
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<term>Parameter estimates</term>
<term>Parameterization</term>
<term>Patchy distributions</term>
<term>Phenomenological functions</term>
<term>Photosynthesis</term>
<term>Photosynthetic</term>
<term>Photosynthetic performance</term>
<term>Photosynthetic rate</term>
<term>Physiological analogy</term>
<term>Physiological basis</term>
<term>Physiological factors</term>
<term>Physiological models</term>
<term>Physiological niche dimensions</term>
<term>Physiological performance</term>
<term>Physiological processes</term>
<term>Physiological rates</term>
<term>Physiological tolerances</term>
<term>Physische geographie</term>
<term>Picea</term>
<term>Picea sitchensis</term>
<term>Pinus</term>
<term>Pinus nigra</term>
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<term>Plant distribution</term>
<term>Plant growth</term>
<term>Plant mass</term>
<term>Plant niche</term>
<term>Plant performance</term>
<term>Plant physiology</term>
<term>Plant size</term>
<term>Plant species</term>
<term>Populus</term>
<term>Populus tremula</term>
<term>Positive rate</term>
<term>Positive rates</term>
<term>Potential biomass</term>
<term>Potential distribution</term>
<term>Prediction errors</term>
<term>Pubescens</term>
<term>Quercus</term>
<term>Quercus species</term>
<term>Range boundaries</term>
<term>Relative abundance</term>
<term>Respiration</term>
<term>Respiration rate</term>
<term>Response functions</term>
<term>Root growth</term>
<term>Schurr</term>
<term>Sitchensis</term>
<term>Soil moisture</term>
<term>Soil nitrogen</term>
<term>Soil temperature</term>
<term>Soil water availability</term>
<term>Solar radiation</term>
<term>Special issue</term>
<term>Species distribution data</term>
<term>Species distribution model</term>
<term>Species distribution modelling</term>
<term>Species distribution models</term>
<term>Species distributions</term>
<term>State variables</term>
<term>Stomatal conductance</term>
<term>Study species</term>
<term>Such models</term>
<term>Supply rates</term>
<term>Sutherst</term>
<term>Sylvatica</term>
<term>Target distribution</term>
<term>Temperature response</term>
<term>Temperature response function</term>
<term>Thornley</term>
<term>Thornley transport resistance</term>
<term>Tmax</term>
<term>Tmean</term>
<term>Tmin</term>
<term>Tree species</term>
<term>Tremula</term>
<term>True positives</term>
<term>Tted</term>
<term>Tted models</term>
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<term>Uptake</term>
<term>Uptake rates</term>
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<div type="abstract">Aim  To develop a physiologically based model of the plant niche for use in species distribution modelling.</div>
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<term>Biogeography</term>
<term>Climate</term>
<term>Distribution range</term>
<term>Ecological niche</term>
<term>Envelope</term>
<term>Europe</term>
<term>Indirect method</term>
<term>Modeling</term>
<term>Models</term>
<term>Sensitivity resistance</term>
<term>Spatial distribution</term>
<term>Statistical method</term>
<term>Transport</term>
<term>Tree</term>
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<keywords scheme="Pascal" xml:lang="fr">
<term>Niche écologique</term>
<term>Climat</term>
<term>Enveloppe</term>
<term>Modélisation</term>
<term>Europe</term>
<term>Arbre</term>
<term>Méthode indirecte</term>
<term>Méthode statistique</term>
<term>Modèle</term>
<term>Répartition spatiale</term>
<term>Aire de distribution</term>
<term>Transport</term>
<term>Sensibilité résistance</term>
<term>Biogéographie</term>
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<div type="abstract" xml:lang="en">Aim To develop a physiologically based model of the plant niche for use in species distribution modelling. Location Europe. Methods We link the Thornley transport resistance (TTR) model with functions which describe how the TTR's model parameters are influenced by abiotic environmental factors. The TTR model considers how carbon and nutrient uptake, and the allocation of these assimilates, influence growth. We use indirect statistical methods to estimate the model parameters from a high resolution data set on tree distribution for 22 European tree species. Results We infer, from distribution data and abiotic forcing data, the physiological niche dimensions of 22 European tree species. We found that the model fits were reasonable (AUC: 0.79-0.964). The projected distributions were characterized by a false positive rate of 0.19 and a false negative rate 0.12. The fitted models are used to generate projections of the environmental factors that limit the range boundaries of the study species. Main conclusions We show that physiological models can be used to derive physiological niche dimensions from species distribution data. Future work should focus on including prior information on physiological rates into the parameter estimation process. Application of the TTR model to species distribution modelling suggests new avenues for establishing explicit links between distribution and physiology, and for generating hypotheses about how ecophysiological processes influence the distribution of plants.</div>
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<name sortKey="Morin, Xavier" sort="Morin, Xavier" uniqKey="Morin X" first="Xavier" last="Morin">Xavier Morin</name>
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<title level="j" type="main">Journal of Biogeography</title>
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<term>Abies</term>
<term>Agriculture ecosystems</term>
<term>Betula</term>
<term>Biochemical model</term>
<term>Biogeography</term>
<term>Biomass</term>
<term>Biomass growth</term>
<term>Biotic</term>
<term>Biotic interactions</term>
<term>Blackwell publishing</term>
<term>Broad distributional patterns</term>
<term>Cambridge university press</term>
<term>Cape town</term>
<term>Carbon gain</term>
<term>Carbon uptake</term>
<term>Climate research centre</term>
<term>Competitive exclusion</term>
<term>Correlative</term>
<term>Correlative methods</term>
<term>Correlative models</term>
<term>Default parameter values</term>
<term>Demographic range models</term>
<term>Differential evolution</term>
<term>Dispersal</term>
<term>Dispersal limitation</term>
<term>Distribution data</term>
<term>Distribution models</term>
<term>Distributional</term>
<term>Distributional data</term>
<term>Dormann</term>
<term>Ecological</term>
<term>Ecological modelling</term>
<term>Ecological niche</term>
<term>Ecology</term>
<term>Ecology letters</term>
<term>Ecophysiological processes</term>
<term>Empirical work</term>
<term>Environmental</term>
<term>Environmental conditions</term>
<term>Environmental dependencies</term>
<term>Environmental factors</term>
<term>Environmental productivity index</term>
<term>Environmental variables</term>
<term>European tree species</term>
<term>Fagus sylvatica</term>
<term>False negatives</term>
<term>False positives</term>
<term>Functional ecology</term>
<term>Functional relationships</term>
<term>Global ecology</term>
<term>Global optimization</term>
<term>Goethe universitat frankfurt</term>
<term>Gross photosynthetic rate</term>
<term>Growth rate</term>
<term>Growth rates</term>
<term>Growth respiration</term>
<term>Guisan zimmermann</term>
<term>Hartig</term>
<term>Higgins</term>
<term>High temperatures</term>
<term>Higher education</term>
<term>Importance sampling</term>
<term>Indirect parameterization</term>
<term>Information content</term>
<term>Informative priors</term>
<term>Inventory data</term>
<term>Koeble seufert</term>
<term>Korner</term>
<term>Land management</term>
<term>Large sets</term>
<term>Leaf temperature</term>
<term>Local abundance</term>
<term>Loewe programme</term>
<term>Maintenance respiration</term>
<term>Major contributions</term>
<term>Mechanistic models</term>
<term>Model parameters</term>
<term>Model performance</term>
<term>Model structure</term>
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<term>Monthly estimates</term>
<term>Monthly time step</term>
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<term>Niche construction</term>
<term>Niche dimensions</term>
<term>Nitrogen</term>
<term>Nitrogen concentration</term>
<term>Nitrogen uptake</term>
<term>Nitrogen uptake rate</term>
<term>Northern spain</term>
<term>Northern species</term>
<term>Nsoil</term>
<term>Nutrient uptake</term>
<term>Parameter</term>
<term>Parameter estimates</term>
<term>Parameterization</term>
<term>Patchy distributions</term>
<term>Phenomenological functions</term>
<term>Photosynthesis</term>
<term>Photosynthetic</term>
<term>Photosynthetic performance</term>
<term>Photosynthetic rate</term>
<term>Physiological analogy</term>
<term>Physiological basis</term>
<term>Physiological factors</term>
<term>Physiological models</term>
<term>Physiological niche dimensions</term>
<term>Physiological performance</term>
<term>Physiological processes</term>
<term>Physiological rates</term>
<term>Physiological tolerances</term>
<term>Physische geographie</term>
<term>Picea</term>
<term>Picea sitchensis</term>
<term>Pinus</term>
<term>Pinus nigra</term>
<term>Plant cell</term>
<term>Plant distribution</term>
<term>Plant growth</term>
<term>Plant mass</term>
<term>Plant niche</term>
<term>Plant performance</term>
<term>Plant physiology</term>
<term>Plant size</term>
<term>Plant species</term>
<term>Populus</term>
<term>Populus tremula</term>
<term>Positive rate</term>
<term>Positive rates</term>
<term>Potential biomass</term>
<term>Potential distribution</term>
<term>Prediction errors</term>
<term>Pubescens</term>
<term>Quercus</term>
<term>Quercus species</term>
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<term>Soil temperature</term>
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<term>Sylvatica</term>
<term>Target distribution</term>
<term>Temperature response</term>
<term>Temperature response function</term>
<term>Thornley</term>
<term>Thornley transport resistance</term>
<term>Tmax</term>
<term>Tmean</term>
<term>Tmin</term>
<term>Tree species</term>
<term>Tremula</term>
<term>True positives</term>
<term>Tted</term>
<term>Tted models</term>
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<term>Uptake rates</term>
<term>Water availability</term>
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<term>Biomass</term>
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<term>Fagus sylvatica</term>
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<term>Global optimization</term>
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<term>Gross photosynthetic rate</term>
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<term>Hartig</term>
<term>Higgins</term>
<term>High temperatures</term>
<term>Higher education</term>
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<term>Large sets</term>
<term>Leaf temperature</term>
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<term>Loewe programme</term>
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<term>Model structure</term>
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<term>Monthly time step</term>
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<term>Nitrogen uptake rate</term>
<term>Northern spain</term>
<term>Northern species</term>
<term>Nsoil</term>
<term>Nutrient uptake</term>
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<term>Patchy distributions</term>
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<term>Photosynthesis</term>
<term>Photosynthetic</term>
<term>Photosynthetic performance</term>
<term>Photosynthetic rate</term>
<term>Physiological analogy</term>
<term>Physiological basis</term>
<term>Physiological factors</term>
<term>Physiological models</term>
<term>Physiological niche dimensions</term>
<term>Physiological performance</term>
<term>Physiological processes</term>
<term>Physiological rates</term>
<term>Physiological tolerances</term>
<term>Physische geographie</term>
<term>Picea</term>
<term>Picea sitchensis</term>
<term>Pinus</term>
<term>Pinus nigra</term>
<term>Plant cell</term>
<term>Plant distribution</term>
<term>Plant growth</term>
<term>Plant mass</term>
<term>Plant niche</term>
<term>Plant performance</term>
<term>Plant physiology</term>
<term>Plant size</term>
<term>Plant species</term>
<term>Populus</term>
<term>Populus tremula</term>
<term>Positive rate</term>
<term>Positive rates</term>
<term>Potential biomass</term>
<term>Potential distribution</term>
<term>Prediction errors</term>
<term>Pubescens</term>
<term>Quercus</term>
<term>Quercus species</term>
<term>Range boundaries</term>
<term>Relative abundance</term>
<term>Respiration</term>
<term>Respiration rate</term>
<term>Response functions</term>
<term>Root growth</term>
<term>Schurr</term>
<term>Sitchensis</term>
<term>Soil moisture</term>
<term>Soil nitrogen</term>
<term>Soil temperature</term>
<term>Soil water availability</term>
<term>Solar radiation</term>
<term>Special issue</term>
<term>Species distribution data</term>
<term>Species distribution model</term>
<term>Species distribution modelling</term>
<term>Species distribution models</term>
<term>Species distributions</term>
<term>State variables</term>
<term>Stomatal conductance</term>
<term>Study species</term>
<term>Such models</term>
<term>Supply rates</term>
<term>Sutherst</term>
<term>Sylvatica</term>
<term>Target distribution</term>
<term>Temperature response</term>
<term>Temperature response function</term>
<term>Thornley</term>
<term>Thornley transport resistance</term>
<term>Tmax</term>
<term>Tmean</term>
<term>Tmin</term>
<term>Tree species</term>
<term>Tremula</term>
<term>True positives</term>
<term>Tted</term>
<term>Tted models</term>
<term>Tting process</term>
<term>Uptake</term>
<term>Uptake rates</term>
<term>Water availability</term>
</keywords>
<keywords scheme="Wicri" type="topic" xml:lang="fr">
<term>Biomasse</term>
<term>écologie</term>
<term>Enseignement supérieur</term>
<term>Azote</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract">Aim  To develop a physiologically based model of the plant niche for use in species distribution modelling.</div>
</front>
</TEI>
</ISTEX>
</double>
</record>

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