Hyperscape: visualization for complex biological networks.
Identifieur interne : 000694 ( Main/Curation ); précédent : 000693; suivant : 000695Hyperscape: visualization for complex biological networks.
Auteurs : Graham L. Cromar [Canada] ; Anthony Zhao [Canada] ; Alex Yang ; John Parkinson [Canada]Source :
- Bioinformatics (Oxford, England) [ 1367-4811 ] ; 2015.
English descriptors
- KwdEn :
- MESH :
- chemical , metabolism : Chromatin.
- metabolism : Elastic Tissue.
- Computer Graphics, Software, Systems Biology.
Abstract
Network biology has emerged as a powerful tool to uncover the organizational properties of living systems through the application of graph theoretic approaches. However, due to limitations in underlying data models and visualization software, knowledge relating to large molecular assemblies and biologically active fragments is poorly represented.
DOI: 10.1093/bioinformatics/btv385
PubMed: 26108529
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000384
- to stream PubMed, to step Curation: Pour aller vers cette notice dans l'étape Curation :000384
- to stream PubMed, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :000384
- to stream Ncbi, to step Merge: Pour aller vers cette notice dans l'étape Curation :001C16
- to stream Ncbi, to step Curation: Pour aller vers cette notice dans l'étape Curation :001C16
- to stream Ncbi, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :001C16
- to stream Main, to step Merge: Pour aller vers cette notice dans l'étape Curation :000695
Links to Exploration step
pubmed:26108529Curation
No country items
Alex Yang<affiliation><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada, Department of Biochemistry and.</nlm:affiliation>
<wicri:noCountry code="subField">Department of Biochemistry and</wicri:noCountry>
</affiliation>
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Hyperscape: visualization for complex biological networks.</title>
<author><name sortKey="Cromar, Graham L" sort="Cromar, Graham L" uniqKey="Cromar G" first="Graham L" last="Cromar">Graham L. Cromar</name>
<affiliation wicri:level="1"><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4</wicri:regionArea>
<wicri:noRegion>M5G 0A4</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Zhao, Anthony" sort="Zhao, Anthony" uniqKey="Zhao A" first="Anthony" last="Zhao">Anthony Zhao</name>
<affiliation wicri:level="1"><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4</wicri:regionArea>
<wicri:noRegion>M5G 0A4</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Yang, Alex" sort="Yang, Alex" uniqKey="Yang A" first="Alex" last="Yang">Alex Yang</name>
<affiliation><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada, Department of Biochemistry and.</nlm:affiliation>
<wicri:noCountry code="subField">Department of Biochemistry and</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Parkinson, John" sort="Parkinson, John" uniqKey="Parkinson J" first="John" last="Parkinson">John Parkinson</name>
<affiliation wicri:level="4"><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada, Department of Biochemistry and Department of Molecular Genetics, University of Toronto, Toronto, ON, M5S 1A8, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada, Department of Biochemistry and Department of Molecular Genetics, University of Toronto, Toronto, ON, M5S 1A8</wicri:regionArea>
<orgName type="university">Université de Toronto</orgName>
<placeName><settlement type="city">Toronto</settlement>
<region type="state">Ontario</region>
</placeName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2015">2015</date>
<idno type="RBID">pubmed:26108529</idno>
<idno type="pmid">26108529</idno>
<idno type="doi">10.1093/bioinformatics/btv385</idno>
<idno type="wicri:Area/PubMed/Corpus">000384</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000384</idno>
<idno type="wicri:Area/PubMed/Curation">000384</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000384</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000384</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000384</idno>
<idno type="wicri:Area/Ncbi/Merge">001C16</idno>
<idno type="wicri:Area/Ncbi/Curation">001C16</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">001C16</idno>
<idno type="wicri:Area/Main/Merge">000695</idno>
<idno type="wicri:Area/Main/Curation">000694</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Hyperscape: visualization for complex biological networks.</title>
<author><name sortKey="Cromar, Graham L" sort="Cromar, Graham L" uniqKey="Cromar G" first="Graham L" last="Cromar">Graham L. Cromar</name>
<affiliation wicri:level="1"><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4</wicri:regionArea>
<wicri:noRegion>M5G 0A4</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Zhao, Anthony" sort="Zhao, Anthony" uniqKey="Zhao A" first="Anthony" last="Zhao">Anthony Zhao</name>
<affiliation wicri:level="1"><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4</wicri:regionArea>
<wicri:noRegion>M5G 0A4</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Yang, Alex" sort="Yang, Alex" uniqKey="Yang A" first="Alex" last="Yang">Alex Yang</name>
<affiliation><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada, Department of Biochemistry and.</nlm:affiliation>
<wicri:noCountry code="subField">Department of Biochemistry and</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Parkinson, John" sort="Parkinson, John" uniqKey="Parkinson J" first="John" last="Parkinson">John Parkinson</name>
<affiliation wicri:level="4"><nlm:affiliation>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada, Department of Biochemistry and Department of Molecular Genetics, University of Toronto, Toronto, ON, M5S 1A8, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Program in Molecular Structure and Function, Hospital for Sick Children, 21-9830 PGCRL, 686 Bay Street, Toronto, ON, M5G 0A4, Canada, Department of Biochemistry and Department of Molecular Genetics, University of Toronto, Toronto, ON, M5S 1A8</wicri:regionArea>
<orgName type="university">Université de Toronto</orgName>
<placeName><settlement type="city">Toronto</settlement>
<region type="state">Ontario</region>
</placeName>
</affiliation>
</author>
</analytic>
<series><title level="j">Bioinformatics (Oxford, England)</title>
<idno type="eISSN">1367-4811</idno>
<imprint><date when="2015" type="published">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Chromatin (metabolism)</term>
<term>Computer Graphics</term>
<term>Elastic Tissue (metabolism)</term>
<term>Software</term>
<term>Systems Biology</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Chromatin</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Elastic Tissue</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Computer Graphics</term>
<term>Software</term>
<term>Systems Biology</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Network biology has emerged as a powerful tool to uncover the organizational properties of living systems through the application of graph theoretic approaches. However, due to limitations in underlying data models and visualization software, knowledge relating to large molecular assemblies and biologically active fragments is poorly represented.</div>
</front>
</TEI>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Canada/explor/ParkinsonCanadaV1/Data/Main/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000694 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Curation/biblio.hfd -nk 000694 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Canada |area= ParkinsonCanadaV1 |flux= Main |étape= Curation |type= RBID |clé= pubmed:26108529 |texte= Hyperscape: visualization for complex biological networks. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Curation/RBID.i -Sk "pubmed:26108529" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Curation/biblio.hfd \ | NlmPubMed2Wicri -a ParkinsonCanadaV1
This area was generated with Dilib version V0.6.29. |