Bidirectional exchange of biogenic volatiles with vegetation: emission sources, reactions, breakdown and deposition
Identifieur interne : 000D80 ( Pmc/Corpus ); précédent : 000D79; suivant : 000D81Bidirectional exchange of biogenic volatiles with vegetation: emission sources, reactions, breakdown and deposition
Auteurs : Ülo Niinemets ; Silvano Fares ; Peter Harley ; Kolby J. JardineSource :
- Plant, cell & environment [ 0140-7791 ] ; 2014.
Abstract
Biogenic volatile organic compound (BVOC) emissions are widely modeled as inputs to atmospheric chemistry simulations. However, BVOC may interact with cellular structures and neighboring leaves in a complex manner during volatile diffusion from the sites of release to leaf boundary layer and during turbulent transport to the atmospheric boundary layer. Furthermore, recent observations demonstrate that the BVOC emissions are bidirectional, and uptake and deposition of BVOC and their oxidation products are the rule rather than the exception. This review summarizes current knowledge of within-leaf reactions of synthesized volatiles with reactive oxygen species (ROS), uptake, deposition and storage of volatiles and their oxidation products as driven by adsorption on leaf surface and solubilization and enzymatic detoxification inside leaves. The available evidence indicates that due to reactions with ROS and enzymatic metabolism, the BVOC gross production rates are much larger than previously thought. The degree to which volatiles react within leaves and can be potentially taken up by vegetation depends on compound reactivity, physicochemical characteristics, as well as their participation in leaf metabolism. We argue that future models should be based on the concept of bidirectional BVOC exchange and consider modification of BVOC sink/source strengths by within-leaf metabolism and storage.
Url:
DOI: 10.1111/pce.12322
PubMed: 24635661
PubMed Central: 4289707
Links to Exploration step
PMC:4289707Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Bidirectional exchange of biogenic volatiles with vegetation: emission sources, reactions, breakdown and deposition</title>
<author><name sortKey="Niinemets, Ulo" sort="Niinemets, Ulo" uniqKey="Niinemets U" first="Ülo" last="Niinemets">Ülo Niinemets</name>
<affiliation><nlm:aff id="A1">Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 1, 51014 Tartu, Estonia</nlm:aff>
</affiliation>
<affiliation><nlm:aff id="A2">Estonian Academy of Sciences, Kohtu 6, 10130 Tallinn, Estonia</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Fares, Silvano" sort="Fares, Silvano" uniqKey="Fares S" first="Silvano" last="Fares">Silvano Fares</name>
<affiliation><nlm:aff id="A3">Consiglio per la Ricerca e la Sperimentazione in Agricoltura, Centro di Ricerca per lo Studio delle Relazioni tra Pianta e Suolo, Via della Navicella 2-4, 00184 Rome, Italy</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Harley, Peter" sort="Harley, Peter" uniqKey="Harley P" first="Peter" last="Harley">Peter Harley</name>
<affiliation><nlm:aff id="A1">Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 1, 51014 Tartu, Estonia</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Jardine, Kolby J" sort="Jardine, Kolby J" uniqKey="Jardine K" first="Kolby J." last="Jardine">Kolby J. Jardine</name>
<affiliation><nlm:aff id="A4">Climate Science Department, Earth Science Division, Lawrence Berkeley, National Laboratory, One Cyclotron Rd, building 64-241, Berkeley, CA 94720, USA</nlm:aff>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PMC</idno>
<idno type="pmid">24635661</idno>
<idno type="pmc">4289707</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4289707</idno>
<idno type="RBID">PMC:4289707</idno>
<idno type="doi">10.1111/pce.12322</idno>
<date when="2014">2014</date>
<idno type="wicri:Area/Pmc/Corpus">000D80</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Bidirectional exchange of biogenic volatiles with vegetation: emission sources, reactions, breakdown and deposition</title>
<author><name sortKey="Niinemets, Ulo" sort="Niinemets, Ulo" uniqKey="Niinemets U" first="Ülo" last="Niinemets">Ülo Niinemets</name>
<affiliation><nlm:aff id="A1">Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 1, 51014 Tartu, Estonia</nlm:aff>
</affiliation>
<affiliation><nlm:aff id="A2">Estonian Academy of Sciences, Kohtu 6, 10130 Tallinn, Estonia</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Fares, Silvano" sort="Fares, Silvano" uniqKey="Fares S" first="Silvano" last="Fares">Silvano Fares</name>
<affiliation><nlm:aff id="A3">Consiglio per la Ricerca e la Sperimentazione in Agricoltura, Centro di Ricerca per lo Studio delle Relazioni tra Pianta e Suolo, Via della Navicella 2-4, 00184 Rome, Italy</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Harley, Peter" sort="Harley, Peter" uniqKey="Harley P" first="Peter" last="Harley">Peter Harley</name>
<affiliation><nlm:aff id="A1">Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 1, 51014 Tartu, Estonia</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Jardine, Kolby J" sort="Jardine, Kolby J" uniqKey="Jardine K" first="Kolby J." last="Jardine">Kolby J. Jardine</name>
<affiliation><nlm:aff id="A4">Climate Science Department, Earth Science Division, Lawrence Berkeley, National Laboratory, One Cyclotron Rd, building 64-241, Berkeley, CA 94720, USA</nlm:aff>
</affiliation>
</author>
</analytic>
<series><title level="j">Plant, cell & environment</title>
<idno type="ISSN">0140-7791</idno>
<idno type="eISSN">1365-3040</idno>
<imprint><date when="2014">2014</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p id="P1">Biogenic volatile organic compound (BVOC) emissions are widely modeled as inputs to atmospheric chemistry simulations. However, BVOC may interact with cellular structures and neighboring leaves in a complex manner during volatile diffusion from the sites of release to leaf boundary layer and during turbulent transport to the atmospheric boundary layer. Furthermore, recent observations demonstrate that the BVOC emissions are bidirectional, and uptake and deposition of BVOC and their oxidation products are the rule rather than the exception. This review summarizes current knowledge of within-leaf reactions of synthesized volatiles with reactive oxygen species (ROS), uptake, deposition and storage of volatiles and their oxidation products as driven by adsorption on leaf surface and solubilization and enzymatic detoxification inside leaves. The available evidence indicates that due to reactions with ROS and enzymatic metabolism, the BVOC gross production rates are much larger than previously thought. The degree to which volatiles react within leaves and can be potentially taken up by vegetation depends on compound reactivity, physicochemical characteristics, as well as their participation in leaf metabolism. We argue that future models should be based on the concept of bidirectional BVOC exchange and consider modification of BVOC sink/source strengths by within-leaf metabolism and storage.</p>
</div>
</front>
</TEI>
<pmc article-type="research-article"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<pmc-dir>properties manuscript</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-journal-id">9309004</journal-id>
<journal-id journal-id-type="pubmed-jr-id">20442</journal-id>
<journal-id journal-id-type="nlm-ta">Plant Cell Environ</journal-id>
<journal-id journal-id-type="iso-abbrev">Plant Cell Environ.</journal-id>
<journal-title-group><journal-title>Plant, cell & environment</journal-title>
</journal-title-group>
<issn pub-type="ppub">0140-7791</issn>
<issn pub-type="epub">1365-3040</issn>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">24635661</article-id>
<article-id pub-id-type="pmc">4289707</article-id>
<article-id pub-id-type="doi">10.1111/pce.12322</article-id>
<article-id pub-id-type="manuscript">EMS61501</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Article</subject>
</subj-group>
</article-categories>
<title-group><article-title>Bidirectional exchange of biogenic volatiles with vegetation: emission sources, reactions, breakdown and deposition</article-title>
</title-group>
<contrib-group><contrib contrib-type="author"><name><surname>Niinemets</surname>
<given-names>Ülo</given-names>
</name>
<xref ref-type="aff" rid="A1">1</xref>
<xref ref-type="aff" rid="A2">2</xref>
<xref ref-type="corresp" rid="CR1">3</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Fares</surname>
<given-names>Silvano</given-names>
</name>
<xref ref-type="aff" rid="A3">4</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Harley</surname>
<given-names>Peter</given-names>
</name>
<xref ref-type="aff" rid="A1">1</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Jardine</surname>
<given-names>Kolby J.</given-names>
</name>
<xref ref-type="aff" rid="A4">5</xref>
</contrib>
</contrib-group>
<aff id="A1"><label>1</label>
Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 1, 51014 Tartu, Estonia</aff>
<aff id="A2"><label>2</label>
Estonian Academy of Sciences, Kohtu 6, 10130 Tallinn, Estonia</aff>
<aff id="A3"><label>4</label>
Consiglio per la Ricerca e la Sperimentazione in Agricoltura, Centro di Ricerca per lo Studio delle Relazioni tra Pianta e Suolo, Via della Navicella 2-4, 00184 Rome, Italy</aff>
<aff id="A4"><label>5</label>
Climate Science Department, Earth Science Division, Lawrence Berkeley, National Laboratory, One Cyclotron Rd, building 64-241, Berkeley, CA 94720, USA</aff>
<author-notes><corresp id="CR1"><label>3</label>
Corresponding author, <email>ylo.niinemets@emu.ee</email>
</corresp>
</author-notes>
<pub-date pub-type="nihms-submitted"><day>12</day>
<month>12</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="epub"><day>06</day>
<month>5</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="ppub"><month>8</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="pmc-release"><day>12</day>
<month>1</month>
<year>2015</year>
</pub-date>
<volume>37</volume>
<issue>8</issue>
<fpage>1790</fpage>
<lpage>1809</lpage>
<pmc-comment>elocation-id from pubmed: 10.1111/pce.12322</pmc-comment>
<abstract><p id="P1">Biogenic volatile organic compound (BVOC) emissions are widely modeled as inputs to atmospheric chemistry simulations. However, BVOC may interact with cellular structures and neighboring leaves in a complex manner during volatile diffusion from the sites of release to leaf boundary layer and during turbulent transport to the atmospheric boundary layer. Furthermore, recent observations demonstrate that the BVOC emissions are bidirectional, and uptake and deposition of BVOC and their oxidation products are the rule rather than the exception. This review summarizes current knowledge of within-leaf reactions of synthesized volatiles with reactive oxygen species (ROS), uptake, deposition and storage of volatiles and their oxidation products as driven by adsorption on leaf surface and solubilization and enzymatic detoxification inside leaves. The available evidence indicates that due to reactions with ROS and enzymatic metabolism, the BVOC gross production rates are much larger than previously thought. The degree to which volatiles react within leaves and can be potentially taken up by vegetation depends on compound reactivity, physicochemical characteristics, as well as their participation in leaf metabolism. We argue that future models should be based on the concept of bidirectional BVOC exchange and consider modification of BVOC sink/source strengths by within-leaf metabolism and storage.</p>
</abstract>
<kwd-group><kwd>catabolism</kwd>
<kwd>compound reactivity</kwd>
<kwd>compound breakdown</kwd>
<kwd>deposition</kwd>
<kwd>emission controls</kwd>
<kwd>reactive oxygen species</kwd>
<kwd>physicochemical characteristics</kwd>
<kwd>volatile uptake</kwd>
</kwd-group>
</article-meta>
</front>
</pmc>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/Pmc/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000D80 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Pmc/Corpus/biblio.hfd -nk 000D80 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Bois |area= OrangerV1 |flux= Pmc |étape= Corpus |type= RBID |clé= PMC:4289707 |texte= Bidirectional exchange of biogenic volatiles with vegetation: emission sources, reactions, breakdown and deposition }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Pmc/Corpus/RBID.i -Sk "pubmed:24635661" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Pmc/Corpus/biblio.hfd \ | NlmPubMed2Wicri -a OrangerV1
This area was generated with Dilib version V0.6.25. |