Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (Citrus sinensis Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene
Identifieur interne : 000B97 ( Pmc/Checkpoint ); précédent : 000B96; suivant : 000B98Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (Citrus sinensis Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene
Auteurs : Xing-Zheng Fu [République populaire de Chine] ; Ji-Hong Liu [République populaire de Chine]Source :
- BioMed Research International [ 2314-6133 ] ; 2012.
Abstract
Citrus canker disease caused by
Url:
DOI: 10.1155/2013/918136
PubMed: 23509803
PubMed Central: 3591164
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (<italic>Citrus sinensis</italic> Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene</title><author><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712</wicri:regionArea><wicri:noRegion>Chongqing 400712</wicri:noRegion></affiliation></author><author><name sortKey="Liu, Ji Hong" sort="Liu, Ji Hong" uniqKey="Liu J" first="Ji-Hong" last="Liu">Ji-Hong Liu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23509803</idno><idno type="pmc">3591164</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3591164</idno><idno type="RBID">PMC:3591164</idno><idno type="doi">10.1155/2013/918136</idno><date when="2012">2012</date><idno type="wicri:Area/Pmc/Corpus">000E45</idno><idno type="wicri:Area/Pmc/Curation">000E44</idno><idno type="wicri:Area/Pmc/Checkpoint">000B97</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (<italic>Citrus sinensis</italic> Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene</title><author><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712</wicri:regionArea><wicri:noRegion>Chongqing 400712</wicri:noRegion></affiliation></author><author><name sortKey="Liu, Ji Hong" sort="Liu, Ji Hong" uniqKey="Liu J" first="Ji-Hong" last="Liu">Ji-Hong Liu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation></author></analytic><series><title level="j">BioMed Research International</title><idno type="ISSN">2314-6133</idno><idno type="eISSN">2314-6141</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Citrus canker disease caused by <italic>Xanthomonas citri</italic> subsp. <italic>citri</italic> (Xcc) is one of the most devastating diseases affecting the citrus industry worldwide. In our previous study, the canker-resistant transgenic sweet orange (<italic>Citrus sinensis</italic> Osbeck) plants were produced <italic>via</italic> constitutively overexpressing a spermidine synthase. To unravel the molecular mechanisms underlying Xcc resistance of the transgenic plants, in the present study global transcriptional profiling was compared between untransformed line (WT) and the transgenic line (TG9) by hybridizing with Affymetrix Citrus GeneChip. In total, 666 differentially expressed genes (DEGs) were identified, 448 upregulated, and 218 downregulated. The DEGs were classified into 33 categories after Gene ontology (GO) annotation, in which 68 genes are in response to stimulus and involved in immune system process, 12 genes are related to cell wall, and 13 genes belong to transcription factors. These genes and those related to starch and sucrose metabolism, glutathione metabolism, biosynthesis of phenylpropanoids, and plant hormones were hypothesized to play major roles in the canker resistance of TG9. Semiquantitative RT-PCR analysis showed that the transcript levels of several candidate genes in TG9 were significantly higher than in WT both before and after Xcc inoculation, indicating their potential association with canker disease.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Brunings, Am" uniqKey="Brunings A">AM Brunings</name></author><author><name sortKey="Gabriel, Dw" uniqKey="Gabriel D">DW Gabriel</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Graham, Jh" uniqKey="Graham J">JH Graham</name></author><author><name sortKey="Gottwald, Tr" uniqKey="Gottwald T">TR Gottwald</name></author><author><name sortKey="Cubero, J" uniqKey="Cubero J">J Cubero</name></author><author><name sortKey="Achor, Ds" uniqKey="Achor D">DS Achor</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Das, Ak" uniqKey="Das A">AK 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<front><journal-meta><journal-id journal-id-type="nlm-ta">Biomed Res Int</journal-id><journal-id journal-id-type="iso-abbrev">Biomed Res Int</journal-id><journal-id journal-id-type="publisher-id">BMRI</journal-id><journal-title-group><journal-title>BioMed Research International</journal-title></journal-title-group><issn pub-type="ppub">2314-6133</issn><issn pub-type="epub">2314-6141</issn><publisher><publisher-name>Hindawi Publishing Corporation</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">23509803</article-id><article-id pub-id-type="pmc">3591164</article-id><article-id pub-id-type="doi">10.1155/2013/918136</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title>Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (<italic>Citrus sinensis</italic> Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Fu</surname><given-names>Xing-Zheng</given-names></name><xref ref-type="aff" rid="I1"><sup>1</sup></xref><xref ref-type="aff" rid="I2"><sup>2</sup></xref></contrib><contrib contrib-type="author"><name><surname>Liu</surname><given-names>Ji-Hong</given-names></name><xref ref-type="aff" rid="I1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1">*</xref></contrib></contrib-group><aff id="I1"><sup>1</sup>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</aff><aff id="I2"><sup>2</sup>Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712, China</aff><author-notes><corresp id="cor1">*Ji-Hong Liu: <email>liujihong@mail.hzau.edu.cn</email></corresp><fn fn-type="other"><p>Academic Editor: Juan Francisco Jiménez Bremont</p></fn></author-notes><pub-date pub-type="ppub"><year>2013</year></pub-date><pub-date pub-type="epub"><day>27</day><month>12</month><year>2012</year></pub-date><volume>2013</volume><elocation-id>918136</elocation-id><history><date date-type="received"><day>29</day><month>7</month><year>2012</year></date><date date-type="rev-recd"><day>23</day><month>9</month><year>2012</year></date><date date-type="accepted"><day>15</day><month>10</month><year>2012</year></date></history><permissions><copyright-statement>Copyright © 2013 X.-Z. Fu and J.-H. Liu.</copyright-statement><copyright-year>2013</copyright-year><license license-type="open-access"><license-p>This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p></license></permissions><abstract><p>Citrus canker disease caused by <italic>Xanthomonas citri</italic> subsp. <italic>citri</italic> (Xcc) is one of the most devastating diseases affecting the citrus industry worldwide. In our previous study, the canker-resistant transgenic sweet orange (<italic>Citrus sinensis</italic> Osbeck) plants were produced <italic>via</italic> constitutively overexpressing a spermidine synthase. To unravel the molecular mechanisms underlying Xcc resistance of the transgenic plants, in the present study global transcriptional profiling was compared between untransformed line (WT) and the transgenic line (TG9) by hybridizing with Affymetrix Citrus GeneChip. In total, 666 differentially expressed genes (DEGs) were identified, 448 upregulated, and 218 downregulated. The DEGs were classified into 33 categories after Gene ontology (GO) annotation, in which 68 genes are in response to stimulus and involved in immune system process, 12 genes are related to cell wall, and 13 genes belong to transcription factors. These genes and those related to starch and sucrose metabolism, glutathione metabolism, biosynthesis of phenylpropanoids, and plant hormones were hypothesized to play major roles in the canker resistance of TG9. Semiquantitative RT-PCR analysis showed that the transcript levels of several candidate genes in TG9 were significantly higher than in WT both before and after Xcc inoculation, indicating their potential association with canker disease.</p></abstract></article-meta></front><floats-group><fig id="fig1" orientation="portrait" position="float"><label>Figure 1</label><caption><p>Validation of microarray results by semiquantitative RT-PCR. Ten probes putatively encoding lipid transfer protein (Cit.60.1.S1_at), glutathione s-transferase (Cit.6308.1.S1_at, Cit.9510.1.S1_s_at), ABC transporter ATPase (Cit.3246.1.S1_at), phospholipase d (Cit.6097.1.S1_s_at), cell wall invertase (Cit.5734.1.S1_at), miraculin-like protein 2 (Cit.57.1.S1_at) and unknown protein (Cit.19313.1.S1_at, Cit.5367.1.S1_at, Cit.1406.1.S1_s_at) were amplified with specific primers in WT and TG9 leaves, using <italic>Actin</italic> gene as an internal control for examining equal cDNA loading. The expression ratios between TG9 and WT were calculated by quantifying the band density using the Quantity One software.</p></caption><graphic xlink:href="BMRI2013-918136.001"></graphic></fig><fig id="fig2" orientation="portrait" position="float"><label>Figure 2</label><caption><p>Functional categorization of upregulated and downregulated differentially expressed genes. 448 significantly upregulated and 218 significantly downregulated DEGs were categorized to biological process, molecular function, and cellular component based on GO annotation, and the represented number of each column was marked in the figure. </p></caption><graphic xlink:href="BMRI2013-918136.002"></graphic></fig><fig id="fig3" orientation="portrait" position="float"><label>Figure 3</label><caption><p>Expression of candidate genes in leaves of WT and TG9 infected or not with <italic>Xanthomonas citri</italic> subsp. <italic>Citri</italic> (Xcc). Eleven candidate genes putatively encoding cysteine proteinase inhibitor (Cit.8163.1.S1_x_at), thaumatin-like protein (Cit.11548.1.S1_at), cytochrome p450 (Cit.4425.1.S1_at), aspartyl protease family protein (Cit.28117.1.S1_s_at), pyruvate kinase (Cit.13055.1.S1_at), pathogenesis-related protein (Cit.20495.1.S1_at), thioredoxin-like 5 (Cit.5856.1.S1_at), AP2/ERF transcription factor (Cit.17124.1.S1_at), NADPH oxidase (Cit.2333.1.S1_at), TIS-NBS-LRR resistance protein (Cit.6121.1.S1_at), and Rubisco subunit binding protein (Cit.31932.1.S1_at) were assessed at 0 and 24 h post inoculation (hpi) in WT and TG9 leaves <italic>via</italic> semiquantitative RT-PCR. Column diagram was the quantification data of corresponding bands using Quantity One software. </p></caption><graphic xlink:href="BMRI2013-918136.003"></graphic></fig><table-wrap id="tab1" orientation="portrait" position="float"><label>Table 1</label><caption><p>Primers pairs used for Genechip verification and expression analysis of candidate genes.</p></caption><table frame="hsides" rules="groups"><thead><tr><th align="left" rowspan="1" colspan="1">Probe ID</th><th align="left" rowspan="1" colspan="1">Primers (5′–3′)</th><th align="center" rowspan="1" colspan="1">Fragment size</th></tr></thead><tbody><tr><td align="left" rowspan="2" colspan="1">Cit.60.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: TGGCGTATTGGGTGGGGCTG<break></break></td><td align="center" rowspan="2" colspan="1">258 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: AGATACCCCCGCCCGTGCAA</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.6308.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: AGCCAGGGCTCGCTTTTGGG<break></break></td><td align="center" rowspan="2" colspan="1">294 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: TCTTGCATCCAAGCTGACACCAGT<break></break></td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.19313.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GTGAGGTATTTCGGCGAGGGG<break></break></td><td align="center" rowspan="2" colspan="1">348 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: GGCTTGCGATAACAGAGTGC</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.5367.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GACAGCCACATTCCAAGCAG<break></break></td><td align="center" rowspan="2" colspan="1">430 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: TGAGGCAAGTAGCGACAACG</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.1406.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">F: TGTTAGGTCTTTTGGTGTCTATTGTT<break></break></td><td align="center" rowspan="2" colspan="1">369 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CAGCCTCAGTTTGGGCATTG</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.9510.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">F: GCTTATGCTTCTCCCAAACGA<break></break></td><td align="center" rowspan="2" colspan="1">450 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: ACCAGCCAAATACTTGCTCTTC</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.3246.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GTGAAAGGAAACGCAACGAA<break></break></td><td align="center" rowspan="2" colspan="1">328 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: TCCCAGGTCCAGTTACCAATG</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.6097.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">F: AGCCTATGTCAAAGCAATCCG<break></break></td><td align="center" rowspan="2" colspan="1">391 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: GCTGCTGTCTACCCCGTCTAA</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.5734.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GCTGCTCGCTTTGGCTTCA<break></break></td><td align="center" rowspan="2" colspan="1">367 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: TTTCTTCATACTCCAGGCACTCA</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.57.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GCTGGCGGCGGTGGAGTTAG<break></break></td><td align="center" rowspan="2" colspan="1">408 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CGAAAAGCGGCCAACGCTGC</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.8163.1.S1_x_at</td><td align="left" rowspan="1" colspan="1">F: AGCGTGGAGAAGGCCTGGAC<break></break></td><td align="center" rowspan="2" colspan="1">217 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CCGCGAACTGCCCGATCTCC</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.11548.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GCCTTACCTTCTCCTTCCTCAT<break></break></td><td align="center" rowspan="2" colspan="1">590 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: AGTCGGTGGGCAAGTCTCA</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.4425.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: ACTCCAACACCTTTATTCCTTCAC<break></break></td><td align="center" rowspan="2" colspan="1">337 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CATCTCCGCTATTGCCCACT</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.28117.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">F: TAGACCGACTGACTGCACCAA<break></break></td><td align="center" rowspan="2" colspan="1">239 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: TGCGAAATACAAAATGAACCC</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.13055.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: TGACTCCGCCGTTGTGAAGA<break></break></td><td align="center" rowspan="2" colspan="1">253 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CACCCGCCGACAACATACA</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.20495.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: TCACGGACAACGAAGACAAAG<break></break></td><td align="center" rowspan="2" colspan="1">179 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: TCAACCAAAGCCGAGCAA</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.5856.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GAAGCAACAGTTCCAGCAGC<break></break></td><td align="center" rowspan="2" colspan="1">264 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CACGAAGCCATCCAGTCAATA</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.17124.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: CAGAAGGCAGCCACGATGA<break></break></td><td align="center" rowspan="2" colspan="1">299 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: GATGAGGATGACGAAGAAGAAGC</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.2333.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: GTGGAAGGGGTAACTGGGATT<break></break></td><td align="center" rowspan="2" colspan="1">461 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: GCAGAAGTTATTGAAAATGGGTG</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.6121.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: AGATGAGTCACAAAGACCAGGAGG<break></break></td><td align="center" rowspan="2" colspan="1">205 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CACAGGCGTCAACCAATCAAG</td></tr><tr><td align="left" rowspan="2" colspan="1">Cit.31932.1.S1_at</td><td align="left" rowspan="1" colspan="1">F: TGTAGTCGGTGGTGGCTGTAG<break></break></td><td align="center" rowspan="2" colspan="1">436 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: TGAAAAGTGGGGTGGCATT</td></tr><tr><td align="left" rowspan="2" colspan="1">Actin</td><td align="left" rowspan="1" colspan="1">F: CATCCCTCAGCACCTTCC<break></break></td><td align="center" rowspan="2" colspan="1">190 bp</td></tr><tr><td align="left" rowspan="1" colspan="1">R: CCAACCTTAGCACTTCTCC</td></tr></tbody></table></table-wrap><table-wrap id="tab2" orientation="portrait" position="float"><label>Table 2</label><caption><p>Significantly upregulated genes in response to stimulus and involved in immune system process.</p></caption><table frame="hsides" rules="groups"><thead><tr><th align="left" rowspan="1" colspan="1">Gene ID</th><th align="left" rowspan="1" colspan="1">Seq. description</th><th align="center" rowspan="1" colspan="1">Hit ACC</th><th align="center" rowspan="1" colspan="1">Fold change</th></tr></thead><tbody><tr><td align="left" rowspan="1" colspan="1">Cit.8878.1.S1_at</td><td align="left" rowspan="1" colspan="1">Major allergen Pru</td><td align="center" rowspan="1" colspan="1">ABK06393</td><td align="center" rowspan="1" colspan="1">8.63139</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.11548.1.S1_at</td><td align="left" rowspan="1" colspan="1">Thaumatin-like protein</td><td align="center" rowspan="1" colspan="1">Q9SMH2</td><td align="center" rowspan="1" colspan="1">5.84254</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.4426.1.S1_at</td><td align="left" rowspan="1" colspan="1">Homogentisate geranyl geranyl transferase</td><td align="center" rowspan="1" colspan="1">XP_002282953</td><td align="center" rowspan="1" colspan="1">5.63043</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9703.1.S1_at</td><td align="left" rowspan="1" colspan="1">Beta-1,3-glucanase</td><td align="center" rowspan="1" colspan="1">CAA03908</td><td align="center" rowspan="1" colspan="1">5.45386</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.29880.1.S1_at</td><td align="left" rowspan="1" colspan="1">ATP binding</td><td align="center" rowspan="1" colspan="1">XP_002517441</td><td align="center" rowspan="1" colspan="1">5.3541</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.4504.1.S1_at</td><td align="left" rowspan="1" colspan="1">Thiamin biosynthesis protein</td><td align="center" rowspan="1" colspan="1">XP_002525602</td><td align="center" rowspan="1" colspan="1">4.83609</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.14918.1.S1_at</td><td align="left" rowspan="1" colspan="1">Basic 7s globulin 2 precursor small</td><td align="center" rowspan="1" colspan="1">XP_002517165</td><td align="center" rowspan="1" colspan="1">4.6577</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.21616.1.S1_at</td><td align="left" rowspan="1" colspan="1">abc transporter</td><td align="center" rowspan="1" colspan="1">CBI40242</td><td align="center" rowspan="1" colspan="1">4.6402</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9706.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Beta-1,3-glucanase</td><td align="center" rowspan="1" colspan="1">ABQ45848</td><td align="center" rowspan="1" colspan="1">4.54013</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.38637.1.S1_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002517054</td><td align="center" rowspan="1" colspan="1">4.25433</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.28117.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Aspartyl protease family protein</td><td align="center" rowspan="1" colspan="1">ABK28718</td><td align="center" rowspan="1" colspan="1">3.93758</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.3949.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Copper zinc superoxide dismutase</td><td align="center" rowspan="1" colspan="1">ACC93637</td><td align="center" rowspan="1" colspan="1">3.85253</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.17438.1.S1_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002284819</td><td align="center" rowspan="1" colspan="1">3.69927</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.12005.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">ATP-binding cassette</td><td align="center" rowspan="1" colspan="1">CBI40242</td><td align="center" rowspan="1" colspan="1">3.65824</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.6364.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Peptidase m</td><td align="center" rowspan="1" colspan="1">XP_002518664</td><td align="center" rowspan="1" colspan="1">3.64541</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.4504.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Thiamin biosynthesis protein</td><td align="center" rowspan="1" colspan="1">XP_002525602</td><td align="center" rowspan="1" colspan="1">3.60992</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.11209.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Nematode-resistance protein</td><td align="center" rowspan="1" colspan="1">XP_002268520</td><td align="center" rowspan="1" colspan="1">3.47979</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.17124.1.S1_at</td><td align="left" rowspan="1" colspan="1">AP2/ERF domain-containing transcription factor</td><td align="center" rowspan="1" colspan="1">NP_182011</td><td align="center" rowspan="1" colspan="1">3.3661</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.35636.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Hypothetical protein</td><td align="center" rowspan="1" colspan="1">XP_002262662</td><td align="center" rowspan="1" colspan="1">3.30867</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9584.1.S1_x_at</td><td align="left" rowspan="1" colspan="1">Glutathione s-transferase</td><td align="center" rowspan="1" colspan="1">XP_002273830</td><td align="center" rowspan="1" colspan="1">3.00065</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9587.1.S1_at</td><td align="left" rowspan="1" colspan="1">Glutathione s-transferase</td><td align="center" rowspan="1" colspan="1">XP_002273830</td><td align="center" rowspan="1" colspan="1">2.91727</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.916.1.S1_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002525204</td><td align="center" rowspan="1" colspan="1">2.89418</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.31147.1.S1_at</td><td align="left" rowspan="1" colspan="1">Disease resistance protein</td><td align="center" rowspan="1" colspan="1">CAN77656</td><td align="center" rowspan="1" colspan="1">2.82347</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9704.1.S1_at</td><td align="left" rowspan="1" colspan="1">Beta-1,3-glucanase</td><td align="center" rowspan="1" colspan="1">ABQ45848</td><td align="center" rowspan="1" colspan="1">2.79617</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.20853.1.S1_at</td><td align="left" rowspan="1" colspan="1">Citrate synthase</td><td align="center" rowspan="1" colspan="1">ACU42176</td><td align="center" rowspan="1" colspan="1">2.79073</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9510.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Glutathione s-transferase</td><td align="center" rowspan="1" colspan="1">XP_002530205</td><td align="center" rowspan="1" colspan="1">2.75554</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.17124.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">AP2/ERF domain-containing transcription factor</td><td align="center" rowspan="1" colspan="1">NP_182011</td><td align="center" rowspan="1" colspan="1">2.72797</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.21717.1.S1_at</td><td align="left" rowspan="1" colspan="1">Wound-induced protein win2</td><td align="center" rowspan="1" colspan="1">XP_002319077</td><td align="center" rowspan="1" colspan="1">2.68663</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.28472.1.S1_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002320004</td><td align="center" rowspan="1" colspan="1">2.68478</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.17374.1.S1_at</td><td align="left" rowspan="1" colspan="1">Calcium binding protein</td><td align="center" rowspan="1" colspan="1">ABK06394</td><td align="center" rowspan="1" colspan="1">2.6752</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.23704.1.S1_at</td><td align="left" rowspan="1" colspan="1">Aspartyl protease family protein</td><td align="center" rowspan="1" colspan="1">ABK28718</td><td align="center" rowspan="1" colspan="1">2.64168</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9587.1.S1_x_at</td><td align="left" rowspan="1" colspan="1">Glutathione s-transferase</td><td align="center" rowspan="1" colspan="1">XP_002273830</td><td align="center" rowspan="1" colspan="1">2.62727</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.2809.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">AP2 domain-containing transcription factor</td><td align="center" rowspan="1" colspan="1">XP_002281709</td><td align="center" rowspan="1" colspan="1">2.62632</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.6280.1.S1_at</td><td align="left" rowspan="1" colspan="1">bt4 protein binding transcription regulator</td><td align="center" rowspan="1" colspan="1">XP_002304319</td><td align="center" rowspan="1" colspan="1">2.60135</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.12004.1.S1_at</td><td align="left" rowspan="1" colspan="1">ATP-binding cassette</td><td align="center" rowspan="1" colspan="1">CBI30263</td><td align="center" rowspan="1" colspan="1">2.57256</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.12589.1.S1_at</td><td align="left" rowspan="1" colspan="1">Syntaxin</td><td align="center" rowspan="1" colspan="1">XP_002326741</td><td align="center" rowspan="1" colspan="1">2.52495</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.32844.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Glutathione s-transferase</td><td align="center" rowspan="1" colspan="1">XP_002520166</td><td align="center" rowspan="1" colspan="1">2.52047</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.31254.1.S1_at</td><td align="left" rowspan="1" colspan="1">ATP-binding cassette</td><td align="center" rowspan="1" colspan="1">CAN77838</td><td align="center" rowspan="1" colspan="1">2.47584</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.12560.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">erd15 protein</td><td align="center" rowspan="1" colspan="1">XP_002268033</td><td align="center" rowspan="1" colspan="1">2.45013</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.38633.1.S1_at</td><td align="left" rowspan="1" colspan="1">Transparent testa 12</td><td align="center" rowspan="1" colspan="1">XP_002314825</td><td align="center" rowspan="1" colspan="1">2.43996</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.24178.1.S1_at</td><td align="left" rowspan="1" colspan="1">sec12-like protein 1</td><td align="center" rowspan="1" colspan="1">CBI40184</td><td align="center" rowspan="1" colspan="1">2.43778</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.3550.1.S1_at</td><td align="left" rowspan="1" colspan="1">Ankyrin repeat-containing</td><td align="center" rowspan="1" colspan="1">XP_002526791</td><td align="center" rowspan="1" colspan="1">2.38623</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.28117.1.S1_at</td><td align="left" rowspan="1" colspan="1">Aspartyl protease family protein</td><td align="center" rowspan="1" colspan="1">ABK28718</td><td align="center" rowspan="1" colspan="1">2.32863</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9584.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Glutathione s-transferase</td><td align="center" rowspan="1" colspan="1">XP_002273830</td><td align="center" rowspan="1" colspan="1">2.32824</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.13439.1.S1_at</td><td align="left" rowspan="1" colspan="1">DNA binding</td><td align="center" rowspan="1" colspan="1">XP_002512121</td><td align="center" rowspan="1" colspan="1">2.32431</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.31932.1.S1_at</td><td align="left" rowspan="1" colspan="1">Rubisco subunit binding-protein beta</td><td align="center" rowspan="1" colspan="1">XP_002514548</td><td align="center" rowspan="1" colspan="1">2.26026</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.4131.1.S1_at</td><td align="left" rowspan="1" colspan="1">Pyridoxal kinase</td><td align="center" rowspan="1" colspan="1">CBI33550</td><td align="center" rowspan="1" colspan="1">2.25534</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.7994.1.S1_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002511077</td><td align="center" rowspan="1" colspan="1">2.22751</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.5117.1.S1_at</td><td align="left" rowspan="1" colspan="1">Universal stress protein</td><td align="center" rowspan="1" colspan="1">XP_002515296</td><td align="center" rowspan="1" colspan="1">2.2129</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.4146.1.S1_at</td><td align="left" rowspan="1" colspan="1">Serine palmitoyltransferase</td><td align="center" rowspan="1" colspan="1">CBI15735</td><td align="center" rowspan="1" colspan="1">2.21272</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.10854.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002514963</td><td align="center" rowspan="1" colspan="1">2.20543</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.21798.1.S1_at</td><td align="left" rowspan="1" colspan="1">Glucosyl transferase</td><td align="center" rowspan="1" colspan="1">ACS87992</td><td align="center" rowspan="1" colspan="1">2.17486</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.465.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Thiamin biosynthetic enzyme</td><td align="center" rowspan="1" colspan="1">XP_002305603</td><td align="center" rowspan="1" colspan="1">2.17393</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.1610.1.S1_at</td><td align="left" rowspan="1" colspan="1">Peptidyl-prolyl cis-trans isomerase-like protein</td><td align="center" rowspan="1" colspan="1">XP_002271056</td><td align="center" rowspan="1" colspan="1">2.17052</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.11040.1.S1_at</td><td align="left" rowspan="1" colspan="1">Hydroxyacylglutathione hydrolase</td><td align="center" rowspan="1" colspan="1">XP_002329233</td><td align="center" rowspan="1" colspan="1">2.1672</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.2333.1.S1_at</td><td align="left" rowspan="1" colspan="1">NADPH oxidase</td><td align="center" rowspan="1" colspan="1">XP_002511059</td><td align="center" rowspan="1" colspan="1">2.15579</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.13055.1.S1_at</td><td align="left" rowspan="1" colspan="1">Pyruvate kinase</td><td align="center" rowspan="1" colspan="1">NP_001065749</td><td align="center" rowspan="1" colspan="1">2.14823</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.26113.1.S1_at</td><td align="left" rowspan="1" colspan="1">Phototropic-responsive nph3 family protein</td><td align="center" rowspan="1" colspan="1">CAN63893</td><td align="center" rowspan="1" colspan="1">2.11134</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.30576.1.S1_at</td><td align="left" rowspan="1" colspan="1">Guanylyl cyclase</td><td align="center" rowspan="1" colspan="1">XP_002277052</td><td align="center" rowspan="1" colspan="1">2.11123</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.836.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002520818</td><td align="center" rowspan="1" colspan="1">2.09287</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.14371.1.S1_at</td><td align="left" rowspan="1" colspan="1">Homogentisic acid geranylgeranyl transferase</td><td align="center" rowspan="1" colspan="1">BAH10642</td><td align="center" rowspan="1" colspan="1">2.08956</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.23824.1.S1_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002263043</td><td align="center" rowspan="1" colspan="1">2.08815</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.32832.1.S1_at</td><td align="left" rowspan="1" colspan="1">Protein</td><td align="center" rowspan="1" colspan="1">XP_002269885</td><td align="center" rowspan="1" colspan="1">2.07239</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.5555.1.S1_at</td><td align="left" rowspan="1" colspan="1">cop9 complex subunit</td><td align="center" rowspan="1" colspan="1">XP_002302493</td><td align="center" rowspan="1" colspan="1">2.05901</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9144.1.S1_at</td><td align="left" rowspan="1" colspan="1">ATP-dependent clp</td><td align="center" rowspan="1" colspan="1">XP_002511102</td><td align="center" rowspan="1" colspan="1">2.05338</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.1554.1.S1_at</td><td align="left" rowspan="1" colspan="1">Membrane protein</td><td align="center" rowspan="1" colspan="1">CBI27668</td><td align="center" rowspan="1" colspan="1">2.03856</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.35569.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Syntaxin</td><td align="center" rowspan="1" colspan="1">XP_002326741</td><td align="center" rowspan="1" colspan="1">2.02263</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.2495.1.S1_at</td><td align="left" rowspan="1" colspan="1">RNA binding protein rp120</td><td align="center" rowspan="1" colspan="1">XP_002511064</td><td align="center" rowspan="1" colspan="1">2.01664</td></tr></tbody></table></table-wrap><table-wrap id="tab3" orientation="portrait" position="float"><label>Table 3</label><caption><p>Significantly upregulated cell wall-related genes.</p></caption><table frame="hsides" rules="groups"><thead><tr><th align="left" rowspan="1" colspan="1">Gene ID</th><th align="left" rowspan="1" colspan="1">Seq. description</th><th align="center" rowspan="1" colspan="1">Hit ACC</th><th align="center" rowspan="1" colspan="1">Fold change</th></tr></thead><tbody><tr><td align="left" rowspan="1" colspan="1">Cit.8163.1.S1_x_at</td><td align="left" rowspan="1" colspan="1">Cysteine proteinase inhibitor</td><td align="center" rowspan="1" colspan="1">P37842</td><td align="center" rowspan="1" colspan="1">268.1240</td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.30421.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Cysteine proteinase inhibitor</td><td align="center" rowspan="1" colspan="1">AAG38521</td><td align="center" rowspan="1" colspan="1">94.58230 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.28011.1.S1_x_at</td><td align="left" rowspan="1" colspan="1">Cysteine proteinase inhibitor</td><td align="center" rowspan="1" colspan="1">AAG38521</td><td align="center" rowspan="1" colspan="1">85.76650 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.14918.1.S1_at</td><td align="left" rowspan="1" colspan="1">Basic 7s globulin 2 precursor small subunit</td><td align="center" rowspan="1" colspan="1">XP_002517165</td><td align="center" rowspan="1" colspan="1">4.65770 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.35636.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Hypothetical protein</td><td align="center" rowspan="1" colspan="1">XP_002262662</td><td align="center" rowspan="1" colspan="1">3.30867 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9510.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">Glutathione s-transferase</td><td align="center" rowspan="1" colspan="1">XP_002530205</td><td align="center" rowspan="1" colspan="1">2.75554 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.14913.1.S1_at</td><td align="left" rowspan="1" colspan="1">Class III chitinase</td><td align="center" rowspan="1" colspan="1">XP_002276365</td><td align="center" rowspan="1" colspan="1">2.68317 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.30421.1.S1_x_at</td><td align="left" rowspan="1" colspan="1">Cysteine proteinase inhibitor</td><td align="center" rowspan="1" colspan="1">AAG38521</td><td align="center" rowspan="1" colspan="1">2.47166 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9064.1.S1_x_at</td><td align="left" rowspan="1" colspan="1">40s ribosomal protein s9</td><td align="center" rowspan="1" colspan="1">XP_002511557</td><td align="center" rowspan="1" colspan="1">2.06885 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9144.1.S1_at</td><td align="left" rowspan="1" colspan="1">ATP-dependent clp</td><td align="center" rowspan="1" colspan="1">XP_002511102</td><td align="center" rowspan="1" colspan="1">2.05338 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.2495.1.S1_at</td><td align="left" rowspan="1" colspan="1">RNA binding protein rp120</td><td align="center" rowspan="1" colspan="1">XP_002511064</td><td align="center" rowspan="1" colspan="1">2.01664 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.9064.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">40s ribosomal protein s9</td><td align="center" rowspan="1" colspan="1">XP_002511557</td><td align="center" rowspan="1" colspan="1">2.00929 </td></tr></tbody></table></table-wrap><table-wrap id="tab4" orientation="portrait" position="float"><label>Table 4</label><caption><p>Significantly upregulated transcription factor related genes.</p></caption><table frame="hsides" rules="groups"><thead><tr><th align="left" rowspan="1" colspan="1">Gene ID</th><th align="left" rowspan="1" colspan="1">Seq. description</th><th align="center" rowspan="1" colspan="1">Hit ACC</th><th align="center" rowspan="1" colspan="1">Fold change</th></tr></thead><tbody><tr><td align="left" rowspan="1" colspan="1">Cit.17124.1.S1_at</td><td align="left" rowspan="1" colspan="1">AP2/ERF domain-containing transcription factor</td><td align="center" rowspan="1" colspan="1">NP_182011</td><td align="center" rowspan="1" colspan="1">3.36610 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.15253.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">MADS-domain transcription factor</td><td align="center" rowspan="1" colspan="1">XP_002273223</td><td align="center" rowspan="1" colspan="1">3.21612 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.17124.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">AP2/ERF domain-containing transcription factor</td><td align="center" rowspan="1" colspan="1">NP_182011</td><td align="center" rowspan="1" colspan="1">2.72797 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.2809.1.S1_s_at</td><td align="left" rowspan="1" colspan="1">AP2 domain-containing transcription factor</td><td align="center" rowspan="1" colspan="1">XP_002281709</td><td align="center" rowspan="1" colspan="1">2.62632 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.6280.1.S1_at</td><td align="left" rowspan="1" colspan="1">BT4 (BTB and TAZ domain protein 4) protein binding transcription regulator</td><td align="center" rowspan="1" colspan="1">XP_002304319</td><td align="center" rowspan="1" colspan="1">2.60135 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.39092.1.S1_at</td><td align="left" rowspan="1" colspan="1">NAC domain protein; IPR003441</td><td align="center" rowspan="1" colspan="1">XP_002300866</td><td align="center" rowspan="1" colspan="1">2.30719 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.29898.1.S1_at</td><td align="left" rowspan="1" colspan="1">Unnamed protein product</td><td align="center" rowspan="1" colspan="1">CBI21863</td><td align="center" rowspan="1" colspan="1">2.20763 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.3005.1.S1_at</td><td align="left" rowspan="1" colspan="1">FLC-like 1 splice variant 4</td><td align="center" rowspan="1" colspan="1">ACB72865</td><td align="center" rowspan="1" colspan="1">2.14257 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.8950.1.S1_at</td><td align="left" rowspan="1" colspan="1">AP2/ERF domain-containing transcription factor</td><td align="center" rowspan="1" colspan="1">ABB89755</td><td align="center" rowspan="1" colspan="1">2.13449 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.30576.1.S1_at</td><td align="left" rowspan="1" colspan="1">Guanylyl cyclase</td><td align="center" rowspan="1" colspan="1">XP_002277052</td><td align="center" rowspan="1" colspan="1">2.11123 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.14044.1.S1_at</td><td align="left" rowspan="1" colspan="1">Transcription factor, putative</td><td align="center" rowspan="1" colspan="1">XP_002514876</td><td align="center" rowspan="1" colspan="1">2.06065 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.15941.1.S1_at</td><td align="left" rowspan="1" colspan="1">Chromatin remodeling complex subunit</td><td align="center" rowspan="1" colspan="1">ABA18099</td><td align="center" rowspan="1" colspan="1">2.05183 </td></tr><tr><td align="left" rowspan="1" colspan="1">Cit.35206.1.S1_at</td><td align="left" rowspan="1" colspan="1">MYB family transcription factor</td><td align="center" rowspan="1" colspan="1">FR828559</td><td align="center" rowspan="1" colspan="1">2.00112 </td></tr></tbody></table></table-wrap></floats-group></pmc><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name></noRegion><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name><name sortKey="Liu, Ji Hong" sort="Liu, Ji Hong" uniqKey="Liu J" first="Ji-Hong" last="Liu">Ji-Hong Liu</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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