Genomics and Bioinformatics Resources for Crop Improvement
Identifieur interne : 000B33 ( Ncbi/Merge ); précédent : 000B32; suivant : 000B34Genomics and Bioinformatics Resources for Crop Improvement
Auteurs : Keiichi Mochida ; Kazuo ShinozakiSource :
- Plant and Cell Physiology [ 0032-0781 ] ; 2010.
Abstract
Recent remarkable innovations in platforms for omics-based research and application development provide crucial resources to promote research in model and applied plant species. A combinatorial approach using multiple omics platforms and integration of their outcomes is now an effective strategy for clarifying molecular systems integral to improving plant productivity. Furthermore, promotion of comparative genomics among model and applied plants allows us to grasp the biological properties of each species and to accelerate gene discovery and functional analyses of genes. Bioinformatics platforms and their associated databases are also essential for the effective design of approaches making the best use of genomic resources, including resource integration. We review recent advances in research platforms and resources in plant omics together with related databases and advances in technology.
Url:
DOI: 10.1093/pcp/pcq027
PubMed: 20208064
PubMed Central: 2852516
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genomics and Bioinformatics Resources for Crop Improvement</title><author><name sortKey="Mochida, Keiichi" sort="Mochida, Keiichi" uniqKey="Mochida K" first="Keiichi" last="Mochida">Keiichi Mochida</name></author><author><name sortKey="Shinozaki, Kazuo" sort="Shinozaki, Kazuo" uniqKey="Shinozaki K" first="Kazuo" last="Shinozaki">Kazuo Shinozaki</name></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">20208064</idno><idno type="pmc">2852516</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2852516</idno><idno type="RBID">PMC:2852516</idno><idno type="doi">10.1093/pcp/pcq027</idno><date when="2010">2010</date><idno type="wicri:Area/Pmc/Corpus">001258</idno><idno type="wicri:Area/Pmc/Curation">001256</idno><idno type="wicri:Area/Pmc/Checkpoint">000F51</idno><idno type="wicri:Area/Ncbi/Merge">000B33</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genomics and Bioinformatics Resources for Crop Improvement</title><author><name sortKey="Mochida, Keiichi" sort="Mochida, Keiichi" uniqKey="Mochida K" first="Keiichi" last="Mochida">Keiichi Mochida</name></author><author><name sortKey="Shinozaki, Kazuo" sort="Shinozaki, Kazuo" uniqKey="Shinozaki K" first="Kazuo" last="Shinozaki">Kazuo Shinozaki</name></author></analytic><series><title level="j">Plant and Cell Physiology</title><idno type="ISSN">0032-0781</idno><idno type="eISSN">1471-9053</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Recent remarkable innovations in platforms for omics-based research and application development provide crucial resources to promote research in model and applied plant species. A combinatorial approach using multiple omics platforms and integration of their outcomes is now an effective strategy for clarifying molecular systems integral to improving plant productivity. Furthermore, promotion of comparative genomics among model and applied plants allows us to grasp the biological properties of each species and to accelerate gene discovery and functional analyses of genes. Bioinformatics platforms and their associated databases are also essential for the effective design of approaches making the best use of genomic resources, including resource integration. We review recent advances in research platforms and resources in plant omics together with related databases and advances in technology.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Adams, Md" uniqKey="Adams M">MD Adams</name></author><author><name sortKey="Soares, Mb" uniqKey="Soares M">MB Soares</name></author><author><name sortKey="Kerlavage, Ar" uniqKey="Kerlavage A">AR Kerlavage</name></author><author><name sortKey="Fields, C" uniqKey="Fields C">C Fields</name></author><author><name sortKey="Venter, Jc" uniqKey="Venter J">JC Venter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Agrawal, Gk" uniqKey="Agrawal G">GK Agrawal</name></author><author><name sortKey="Yonekura, M" uniqKey="Yonekura M">M Yonekura</name></author><author><name sortKey="Iwahashi, Y" uniqKey="Iwahashi Y">Y Iwahashi</name></author><author><name sortKey="Iwahashi, H" uniqKey="Iwahashi H">H Iwahashi</name></author><author><name sortKey="Rakwal, R" uniqKey="Rakwal R">R Rakwal</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Akhunov, E" uniqKey="Akhunov E">E Akhunov</name></author><author><name sortKey="Nicolet, C" uniqKey="Nicolet C">C Nicolet</name></author><author><name sortKey="Dvorak, J" uniqKey="Dvorak J">J Dvorak</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Akiyama, K" uniqKey="Akiyama K">K Akiyama</name></author><author><name sortKey="Chikayama, E" uniqKey="Chikayama E">E Chikayama</name></author><author><name sortKey="Yuasa, H" uniqKey="Yuasa H">H Yuasa</name></author><author><name sortKey="Shimada, Y" uniqKey="Shimada Y">Y Shimada</name></author><author><name sortKey="Tohge, T" uniqKey="Tohge T">T. 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<front><journal-meta><journal-id journal-id-type="nlm-ta">Plant Cell Physiol</journal-id><journal-id journal-id-type="iso-abbrev">Plant Cell Physiol</journal-id><journal-id journal-id-type="publisher-id">pcp</journal-id><journal-id journal-id-type="hwp">pcellphys</journal-id><journal-title-group><journal-title>Plant and Cell Physiology</journal-title></journal-title-group><issn pub-type="ppub">0032-0781</issn><issn pub-type="epub">1471-9053</issn><publisher><publisher-name>Oxford University Press</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">20208064</article-id><article-id pub-id-type="pmc">2852516</article-id><article-id pub-id-type="doi">10.1093/pcp/pcq027</article-id><article-id pub-id-type="publisher-id">pcq021</article-id><article-categories><subj-group subj-group-type="heading"><subject>Mini Review</subject></subj-group></article-categories><title-group><article-title>Genomics and Bioinformatics Resources for Crop Improvement</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Mochida</surname><given-names>Keiichi</given-names></name></contrib><contrib contrib-type="author"><name><surname>Shinozaki</surname><given-names>Kazuo</given-names></name><xref ref-type="corresp" rid="COR1">*</xref></contrib></contrib-group><aff>RIKEN Plant Science Center, Yokohama, 230-0045 Japan</aff><author-notes><corresp id="COR1">*Corresponding author: E-mail, <email>sinozaki@rtc.riken.jp</email>; Fax, <fax>+81-45-503-9580</fax></corresp></author-notes><pub-date pub-type="ppub"><month>4</month><year>2010</year></pub-date><pub-date pub-type="epub"><day>8</day><month>4</month><year>2010</year></pub-date><pub-date pub-type="pmc-release"><day>8</day><month>4</month><year>2010</year></pub-date><pmc-comment> PMC Release delay is 0 months and 0 days and was based on the
<volume>51</volume><issue>4</issue><fpage>497</fpage><lpage>523</lpage><history><date date-type="received"><day>8</day><month>2</month><year>2010</year></date><date date-type="accepted"><day>1</day><month>3</month><year>2010</year></date></history><permissions><copyright-statement>© The Author 2010. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists.</copyright-statement><copyright-year>2010</copyright-year><license license-type="creative-commons" xlink:href="http://creativecommons.org/licenses/by-nc/2.5"><license-p><pmc-comment>CREATIVE COMMONS</pmc-comment>This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by-nc/2.5">http://creativecommons.org/licenses/by-nc/2.5</ext-link>), which permits unrestricted non-commercial use distribution, and reproduction in any medium, provided the original work is properly cited.</license-p></license></permissions><abstract><p>Recent remarkable innovations in platforms for omics-based research and application development provide crucial resources to promote research in model and applied plant species. A combinatorial approach using multiple omics platforms and integration of their outcomes is now an effective strategy for clarifying molecular systems integral to improving plant productivity. Furthermore, promotion of comparative genomics among model and applied plants allows us to grasp the biological properties of each species and to accelerate gene discovery and functional analyses of genes. Bioinformatics platforms and their associated databases are also essential for the effective design of approaches making the best use of genomic resources, including resource integration. We review recent advances in research platforms and resources in plant omics together with related databases and advances in technology.</p></abstract><kwd-group><kwd>Bioinformatics</kwd><kwd>Database</kwd><kwd>Omics resource</kwd></kwd-group></article-meta></front></pmc><affiliations><list></list><tree><noCountry><name sortKey="Mochida, Keiichi" sort="Mochida, Keiichi" uniqKey="Mochida K" first="Keiichi" last="Mochida">Keiichi Mochida</name><name sortKey="Shinozaki, Kazuo" sort="Shinozaki, Kazuo" uniqKey="Shinozaki K" first="Kazuo" last="Shinozaki">Kazuo Shinozaki</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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