Genetic diversity and phylogenetic analysis of Citrus (L) from north-east India as revealed by meiosis, and molecular analysis of internal transcribed spacer region of rDNA
Identifieur interne : 000A69 ( Main/Curation ); précédent : 000A68; suivant : 000A70Genetic diversity and phylogenetic analysis of Citrus (L) from north-east India as revealed by meiosis, and molecular analysis of internal transcribed spacer region of rDNA
Auteurs : Marlykynti Hynniewta ; Surendra Kumar Malik ; Satyawada Rama RaoSource :
- Meta Gene [ 2214-5400 ] ; 2014.
Abstract
The north-eastern region of India is reported to be the center of origin and rich in diversity of
Url:
DOI: 10.1016/j.mgene.2014.01.008
PubMed: 25606407
PubMed Central: 4287869
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genetic diversity and phylogenetic analysis of <italic>Citrus</italic> (L) from north-east India as revealed by meiosis, and molecular analysis of internal transcribed spacer region of rDNA</title><author><name sortKey="Hynniewta, Marlykynti" sort="Hynniewta, Marlykynti" uniqKey="Hynniewta M" first="Marlykynti" last="Hynniewta">Marlykynti Hynniewta</name></author><author><name sortKey="Malik, Surendra Kumar" sort="Malik, Surendra Kumar" uniqKey="Malik S" first="Surendra Kumar" last="Malik">Surendra Kumar Malik</name></author><author><name sortKey="Rao, Satyawada Rama" sort="Rao, Satyawada Rama" uniqKey="Rao S" first="Satyawada Rama" last="Rao">Satyawada Rama Rao</name></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25606407</idno><idno type="pmc">4287869</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4287869</idno><idno type="RBID">PMC:4287869</idno><idno type="doi">10.1016/j.mgene.2014.01.008</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">001065</idno><idno type="wicri:Area/Pmc/Curation">001064</idno><idno type="wicri:Area/Pmc/Checkpoint">000812</idno><idno type="wicri:Area/Ncbi/Merge">001983</idno><idno type="wicri:Area/Ncbi/Curation">001983</idno><idno type="wicri:Area/Ncbi/Checkpoint">001983</idno><idno type="wicri:Area/Main/Merge">000A70</idno><idno type="wicri:Area/Main/Curation">000A69</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genetic diversity and phylogenetic analysis of <italic>Citrus</italic> (L) from north-east India as revealed by meiosis, and molecular analysis of internal transcribed spacer region of rDNA</title><author><name sortKey="Hynniewta, Marlykynti" sort="Hynniewta, Marlykynti" uniqKey="Hynniewta M" first="Marlykynti" last="Hynniewta">Marlykynti Hynniewta</name></author><author><name sortKey="Malik, Surendra Kumar" sort="Malik, Surendra Kumar" uniqKey="Malik S" first="Surendra Kumar" last="Malik">Surendra Kumar Malik</name></author><author><name sortKey="Rao, Satyawada Rama" sort="Rao, Satyawada Rama" uniqKey="Rao S" first="Satyawada Rama" last="Rao">Satyawada Rama Rao</name></author></analytic><series><title level="j">Meta Gene</title><idno type="eISSN">2214-5400</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The north-eastern region of India is reported to be the center of origin and rich in diversity of <italic>Citrus</italic> (L.) species, where some wild and endangered species namely <italic>Citrus indica</italic>, <italic>Citrus macroptera</italic>, <italic>Citrus latipes</italic>, <italic>Citrus ichagensis</italic> and <italic>Citrus assamensis</italic> exist in their natural and undisturbed habitat. In order to have comprehensive information about the extent of genetic variability and the occurrence of cryptic genomic hybridity between and within various <italic>Citrus</italic> species, a combined approach involving morphological, cytogenetical and molecular approaches were adopted in the present study. Cytogenetic approaches are known to resolve taxonomic riddles in a more efficient manner, by clearly delineating taxa at species and sub species levels. Male meiotic studies revealed a gametic chromosome number of n = 9, without any evidence of numerical variations. Bivalents outnumbered all other types of associations in pollen mother cells (PMCs) analyzed at diplotene, diakinesis and metaphase I. Univalents were frequently encountered in nine species presently studied, though their presence appropriately did not influence the distributional pattern of the chromosomes at anaphases I and II. The molecular approaches for phylogenetic analysis based on sequence data related to ITS 1, ITS 2 and ITS 1 + 5.8 s + ITS 2 of rDNA using maximum parsimony method and Bayesian inference have thrown light on species inter-relationship and evolution of <italic>Citrus</italic> species confirming our cytogenetical interpretations. The three true basic species i.e. <italic>Citrus medica</italic>, <italic>Citrus maxima</italic> and <italic>Citrus reticulata</italic> with their unique status have been resolved into distinct clades with molecular approaches as well. <italic>C. indica</italic> which occupies a unique position in the phylogenetic ladder of the genus <italic>Citrus</italic> has been resolved as a distinct clade and almost behaving as an out-group. The presences of quadrivalents in <italic>C. indica</italic> also echo and support its unique position. From our study it is amply clear that <italic>C. reticulata</italic> also has close relation to <italic>C. ichagensis</italic>, as these species have clustered together, denoting their close genetic relationship. On the other hand, our studies did not demonstrate a clear differentiation between subgenera <italic>Citrus</italic> and <italic>Papeda</italic> at the rDNA level. The combined approach of cytogenetical and molecular analysis did complement our early karyological findings and helped in resolving many a taxonomic riddles.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Abkenar, A A" uniqKey="Abkenar A">A.A. Abkenar</name></author><author><name sortKey="Isshiki, S" uniqKey="Isshiki S">S. Isshiki</name></author><author><name sortKey="Tashino, Y" uniqKey="Tashino Y">Y. Tashino</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Agarwal, P K" uniqKey="Agarwal P">P.K. 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Zhang</name></author><author><name sortKey="Chen, K S" uniqKey="Chen K">K.S. Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yan, G" uniqKey="Yan G">G. Yan</name></author><author><name sortKey="Ferguson, A R" uniqKey="Ferguson A">A.R. Ferguson</name></author><author><name sortKey="Mcneilage, M A" uniqKey="Mcneilage M">M.A. McNeilage</name></author><author><name sortKey="Murray, B G" uniqKey="Murray B">B.G. Murray</name></author></analytic></biblStruct></listBibl></div1></back></TEI></record>Pour manipuler ce document sous Unix (Dilib)
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