Mitochondrial and nuclear DNA diversity within six species of Phytophthora
Identifieur interne : 001761 ( Istex/Corpus ); précédent : 001760; suivant : 001762Mitochondrial and nuclear DNA diversity within six species of Phytophthora
Auteurs : Helga Fo Rster ; Peter Oudemans ; Michael D. CoffeySource :
- Experimental Mycology [ 0147-5975 ] ; 1990.
English descriptors
- KwdEn :
Abstract
Abstract: The extent of intraspecific mitochondrial DNA (mtDNA) diversity was investigated in isolates ofPhytophthora capsici,P. citricola, P. citrophthora, P. megakarya, P. palmivora, andP. parasitica that represented a wide range of host plants and geographic origins. Phenograms were constructed following the analysis of restriction fragment patterns that were generated by several endonucleases. The six species showed different degrees of mtDNA diversity. Restriction fragment patterns inP. palmivora andP. parasitica were very uniform. Distinct subgroups could be distinguished inP. megakarya andP. citrophthora that correlated with the geographic origin or the host plant, respectively. These subgroups did not seem to be closely related to each other. High degrees of diversity were also evident inP. citricola andP. capsici. Although some isolates ofP. capsici had identical mtDNA patterns, no distinct subgroups were found that could be correlated with either a specific host plant or geographic origin. InP. capsici andP. parasitica variation in nuclear DNA was much more pronounced as compared to mtDNA. InP. capsici both types of analysis correlated well. Because of very limited variation of mtDNA inP. parasitica a comparison between the two phenograms was difficult.
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DOI: 10.1016/0147-5975(90)90083-6
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<term>Phytophthora megakarya</term>
<term>Phytophthora palmivora</term>
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<front><div type="abstract" xml:lang="en">Abstract: The extent of intraspecific mitochondrial DNA (mtDNA) diversity was investigated in isolates ofPhytophthora capsici,P. citricola, P. citrophthora, P. megakarya, P. palmivora, andP. parasitica that represented a wide range of host plants and geographic origins. Phenograms were constructed following the analysis of restriction fragment patterns that were generated by several endonucleases. The six species showed different degrees of mtDNA diversity. Restriction fragment patterns inP. palmivora andP. parasitica were very uniform. Distinct subgroups could be distinguished inP. megakarya andP. citrophthora that correlated with the geographic origin or the host plant, respectively. These subgroups did not seem to be closely related to each other. High degrees of diversity were also evident inP. citricola andP. capsici. Although some isolates ofP. capsici had identical mtDNA patterns, no distinct subgroups were found that could be correlated with either a specific host plant or geographic origin. InP. capsici andP. parasitica variation in nuclear DNA was much more pronounced as compared to mtDNA. InP. capsici both types of analysis correlated well. Because of very limited variation of mtDNA inP. parasitica a comparison between the two phenograms was difficult.</div>
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<abstract xml:lang="en"><p>Abstract: The extent of intraspecific mitochondrial DNA (mtDNA) diversity was investigated in isolates ofPhytophthora capsici,P. citricola, P. citrophthora, P. megakarya, P. palmivora, andP. parasitica that represented a wide range of host plants and geographic origins. Phenograms were constructed following the analysis of restriction fragment patterns that were generated by several endonucleases. The six species showed different degrees of mtDNA diversity. Restriction fragment patterns inP. palmivora andP. parasitica were very uniform. Distinct subgroups could be distinguished inP. megakarya andP. citrophthora that correlated with the geographic origin or the host plant, respectively. These subgroups did not seem to be closely related to each other. High degrees of diversity were also evident inP. citricola andP. capsici. Although some isolates ofP. capsici had identical mtDNA patterns, no distinct subgroups were found that could be correlated with either a specific host plant or geographic origin. InP. capsici andP. parasitica variation in nuclear DNA was much more pronounced as compared to mtDNA. InP. capsici both types of analysis correlated well. Because of very limited variation of mtDNA inP. parasitica a comparison between the two phenograms was difficult.</p>
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<item><term>Phytophthora citrophthora</term>
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<item><term>Phytophthora megakarya</term>
</item>
<item><term>Phytophthora palmivora</term>
</item>
<item><term>Phytophthora parasitica</term>
</item>
<item><term>Phytophthora arecae</term>
</item>
<item><term>restriction fragment length polymorphisms</term>
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<item><term>mitochondrial DNA</term>
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<item><term>nuclear DNA</term>
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<head><ce:title>Mitochondrial and nuclear DNA diversity within six species of<ce:italic>Phytophthora</ce:italic>
</ce:title>
<ce:author-group><ce:author><ce:given-name>Helga</ce:given-name>
<ce:surname>Fo¨rster</ce:surname>
</ce:author>
<ce:author><ce:given-name>Peter</ce:given-name>
<ce:surname>Oudemans</ce:surname>
</ce:author>
<ce:author><ce:given-name>Michael D.</ce:given-name>
<ce:surname>Coffey</ce:surname>
</ce:author>
<ce:affiliation><ce:textfn>Department of Plant Pathology, University of California, Riverside, California 92521-0122 USA</ce:textfn>
</ce:affiliation>
</ce:author-group>
<ce:date-accepted day="19" month="7" year="1989"></ce:date-accepted>
<ce:abstract id="ab1" class="author" xml:lang="en"><ce:section-title>Abstract</ce:section-title>
<ce:abstract-sec><ce:simple-para>The extent of intraspecific mitochondrial DNA (mtDNA) diversity was investigated in isolates of<ce:italic>Phytophthora capsici</ce:italic>
,<ce:italic>P. citricola, P. citrophthora, P. megakarya, P. palmivora</ce:italic>
, and<ce:italic>P. parasitica</ce:italic>
that represented a wide range of host plants and geographic origins. Phenograms were constructed following the analysis of restriction fragment patterns that were generated by several endonucleases. The six species showed different degrees of mtDNA diversity. Restriction fragment patterns in<ce:italic>P. palmivora</ce:italic>
and<ce:italic>P. parasitica</ce:italic>
were very uniform. Distinct subgroups could be distinguished in<ce:italic>P. megakarya</ce:italic>
and<ce:italic>P. citrophthora</ce:italic>
that correlated with the geographic origin or the host plant, respectively. These subgroups did not seem to be closely related to each other. High degrees of diversity were also evident in<ce:italic>P. citricola</ce:italic>
and<ce:italic>P. capsici</ce:italic>
. Although some isolates of<ce:italic>P. capsici</ce:italic>
had identical mtDNA patterns, no distinct subgroups were found that could be correlated with either a specific host plant or geographic origin. In<ce:italic>P. capsici</ce:italic>
and<ce:italic>P. parasitica</ce:italic>
variation in nuclear DNA was much more pronounced as compared to mtDNA. In<ce:italic>P. capsici</ce:italic>
both types of analysis correlated well. Because of very limited variation of mtDNA in<ce:italic>P. parasitica</ce:italic>
a comparison between the two phenograms was difficult.</ce:simple-para>
</ce:abstract-sec>
</ce:abstract>
<ce:keywords class="keyword"><ce:section-title>Keywords</ce:section-title>
<ce:keyword><ce:text><ce:italic>Phytophthora capsici</ce:italic>
</ce:text>
</ce:keyword>
<ce:keyword><ce:text><ce:italic>Phytophthora citricola</ce:italic>
</ce:text>
</ce:keyword>
<ce:keyword><ce:text><ce:italic>Phytophthora citrophthora</ce:italic>
</ce:text>
</ce:keyword>
<ce:keyword><ce:text><ce:italic>Phytophthora megakarya</ce:italic>
</ce:text>
</ce:keyword>
<ce:keyword><ce:text><ce:italic>Phytophthora palmivora</ce:italic>
</ce:text>
</ce:keyword>
<ce:keyword><ce:text><ce:italic>Phytophthora parasitica</ce:italic>
</ce:text>
</ce:keyword>
<ce:keyword><ce:text><ce:italic>Phytophthora arecae</ce:italic>
</ce:text>
</ce:keyword>
<ce:keyword><ce:text>restriction fragment length polymorphisms</ce:text>
</ce:keyword>
<ce:keyword><ce:text>mitochondrial DNA</ce:text>
</ce:keyword>
<ce:keyword><ce:text>nuclear DNA</ce:text>
</ce:keyword>
</ce:keywords>
</head>
<tail><ce:bibliography><ce:section-title>Reference</ce:section-title>
<ce:bibliography-sec><ce:bib-reference id="bib1"><ce:label>Birley and Croft, 1986</ce:label>
<sb:reference><sb:contribution><sb:authors><sb:author><ce:surname>Birley</ce:surname>
<ce:given-name>A.J.</ce:given-name>
</sb:author>
<sb:author><ce:surname>Croft</ce:surname>
<ce:given-name>J.H.</ce:given-name>
</sb:author>
</sb:authors>
<sb:title><sb:maintitle>Mitochondrial DNAs and phylogenetic relationships</sb:maintitle>
</sb:title>
</sb:contribution>
<sb:host><sb:edited-book><sb:editors><sb:editor><ce:surname>Dutta</ce:surname>
<ce:given-name>S.K.</ce:given-name>
</sb:editor>
</sb:editors>
<sb:title><sb:maintitle>DNA Systematics</sb:maintitle>
</sb:title>
<sb:date>1986</sb:date>
<sb:publisher><sb:name>CRC Press</sb:name>
<sb:location>Boca Raton, FL</sb:location>
</sb:publisher>
</sb:edited-book>
<sb:pages><sb:first-page>107</sb:first-page>
<sb:last-page>137</sb:last-page>
</sb:pages>
</sb:host>
</sb:reference>
</ce:bib-reference>
<ce:bib-reference id="bib2"><ce:label>Brasier and Griffin, 1979</ce:label>
<sb:reference><sb:contribution><sb:authors><sb:author><ce:surname>Brasier</ce:surname>
<ce:given-name>C.M.</ce:given-name>
</sb:author>
<sb:author><ce:surname>Griffin</ce:surname>
<ce:given-name>M.J.</ce:given-name>
</sb:author>
</sb:authors>
<sb:title><sb:maintitle>Taxonomy of “<ce:italic>Phytophthora palmivora</ce:italic>
” on cocoa</sb:maintitle>
</sb:title>
</sb:contribution>
<sb:host><sb:issue><sb:series><sb:title><sb:maintitle>Trans. Brit. Mycol. Soc.</sb:maintitle>
</sb:title>
<sb:volume-nr>72</sb:volume-nr>
</sb:series>
<sb:date>1979</sb:date>
</sb:issue>
<sb:pages><sb:first-page>111</sb:first-page>
<sb:last-page>143</sb:last-page>
</sb:pages>
</sb:host>
</sb:reference>
</ce:bib-reference>
<ce:bib-reference id="bib3"><ce:label>Burnett, 1987</ce:label>
<sb:reference><sb:contribution><sb:authors><sb:author><ce:surname>Burnett</ce:surname>
<ce:given-name>J.H.</ce:given-name>
</sb:author>
</sb:authors>
<sb:title><sb:maintitle>Aspects of the macro- and micro-evolution of the fungi</sb:maintitle>
</sb:title>
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<mods version="3.6"><titleInfo lang="en"><title>Mitochondrial and nuclear DNA diversity within six species of Phytophthora</title>
</titleInfo>
<titleInfo type="alternative" lang="en" contentType="CDATA"><title>Mitochondrial and nuclear DNA diversity within six species of</title>
</titleInfo>
<name type="personal"><namePart type="given">Helga</namePart>
<namePart type="family">Fo¨rster</namePart>
<affiliation>Department of Plant Pathology, University of California, Riverside, California 92521-0122 USA</affiliation>
<role><roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal"><namePart type="given">Peter</namePart>
<namePart type="family">Oudemans</namePart>
<affiliation>Department of Plant Pathology, University of California, Riverside, California 92521-0122 USA</affiliation>
<role><roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal"><namePart type="given">Michael D.</namePart>
<namePart type="family">Coffey</namePart>
<affiliation>Department of Plant Pathology, University of California, Riverside, California 92521-0122 USA</affiliation>
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<originInfo><publisher>ELSEVIER</publisher>
<dateIssued encoding="w3cdtf">1990</dateIssued>
<copyrightDate encoding="w3cdtf">1990</copyrightDate>
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<language><languageTerm type="code" authority="iso639-2b">eng</languageTerm>
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<abstract lang="en">Abstract: The extent of intraspecific mitochondrial DNA (mtDNA) diversity was investigated in isolates ofPhytophthora capsici,P. citricola, P. citrophthora, P. megakarya, P. palmivora, andP. parasitica that represented a wide range of host plants and geographic origins. Phenograms were constructed following the analysis of restriction fragment patterns that were generated by several endonucleases. The six species showed different degrees of mtDNA diversity. Restriction fragment patterns inP. palmivora andP. parasitica were very uniform. Distinct subgroups could be distinguished inP. megakarya andP. citrophthora that correlated with the geographic origin or the host plant, respectively. These subgroups did not seem to be closely related to each other. High degrees of diversity were also evident inP. citricola andP. capsici. Although some isolates ofP. capsici had identical mtDNA patterns, no distinct subgroups were found that could be correlated with either a specific host plant or geographic origin. InP. capsici andP. parasitica variation in nuclear DNA was much more pronounced as compared to mtDNA. InP. capsici both types of analysis correlated well. Because of very limited variation of mtDNA inP. parasitica a comparison between the two phenograms was difficult.</abstract>
<subject lang="en"><genre>Keywords</genre>
<topic>Phytophthora capsici</topic>
<topic>Phytophthora citricola</topic>
<topic>Phytophthora citrophthora</topic>
<topic>Phytophthora megakarya</topic>
<topic>Phytophthora palmivora</topic>
<topic>Phytophthora parasitica</topic>
<topic>Phytophthora arecae</topic>
<topic>restriction fragment length polymorphisms</topic>
<topic>mitochondrial DNA</topic>
<topic>nuclear DNA</topic>
</subject>
<relatedItem type="host"><titleInfo><title>Experimental Mycology</title>
</titleInfo>
<titleInfo type="abbreviated"><title>YEMYC</title>
</titleInfo>
<genre type="journal">journal</genre>
<originInfo><dateIssued encoding="w3cdtf">199003</dateIssued>
</originInfo>
<identifier type="ISSN">0147-5975</identifier>
<identifier type="PII">S0147-5975(00)X0058-8</identifier>
<part><date>199003</date>
<detail type="volume"><number>14</number>
<caption>vol.</caption>
</detail>
<detail type="issue"><number>1</number>
<caption>no.</caption>
</detail>
<extent unit="issue pages"><start>1</start>
<end>99</end>
</extent>
<extent unit="pages"><start>18</start>
<end>31</end>
</extent>
</part>
</relatedItem>
<identifier type="istex">38EC07C4FE2C4677EDB650C4A7C427AD9B6D0B95</identifier>
<identifier type="DOI">10.1016/0147-5975(90)90083-6</identifier>
<identifier type="PII">0147-5975(90)90083-6</identifier>
<identifier type="ArticleID">90900836</identifier>
<accessCondition type="use and reproduction" contentType="copyright">©1990 Academic Press, Inc.</accessCondition>
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