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GC‐MS Analysis of Headspace and Liquid Extracts for Metabolomic Differentiation of Citrus Huanglongbing and Zinc Deficiency in Leaves of ‘Valencia’ Sweet Orange from Commercial Groves

Identifieur interne : 000639 ( Istex/Corpus ); précédent : 000638; suivant : 000640

GC‐MS Analysis of Headspace and Liquid Extracts for Metabolomic Differentiation of Citrus Huanglongbing and Zinc Deficiency in Leaves of ‘Valencia’ Sweet Orange from Commercial Groves

Auteurs : Juan Manuel Cevallos-Cevallos ; Rosalía García-Torres ; Edgardo Etxeberria ; José Ignacio Reyes-De-Corcuera

Source :

RBID : ISTEX:CD06B94FA0DE49EA1862FA14B8F0E6AB58E2DA8C

English descriptors

Abstract

Introduction – Citrus Huanglongbing (HLB) is considered the most destructive citrus disease worldwide. Symptoms‐based detection of HLB is difficult due to similarities with zinc deficiency. Objective – To find metabolic differences between leaves from HLB‐infected, zinc‐deficient, and healthy ‘Valencia’ orange trees by using GC‐MS based metabolomics. Methodology – Analysis based on GC‐MS methods for untargeted metabolite analysis of citrus leaves was developed and optimized. Sample extracts from healthy, zinc deficient, or HLB‐infected sweet orange leaves were submitted to headspace solid phase micro‐extraction (SPME) and derivatization treatments prior to GC‐MS analysis. Results – Principal components analysis achieved correct classification of all the derivatized liquid extracts. Analysis of variance revealed 6 possible biomarkers for HLB, of which 5 were identified as proline, β‐elemene, (‐)trans‐ caryophyllene, and α‐humulene. Significant (P < 0.05) differences in oxo‐butanedioic acid, arabitol, and neo‐inositol were exclusively detected in samples from plants with zinc deficiency. Levels of isocaryophyllen, α‐selinene, β‐selinene, and fructose were significantly (P < 0.05) different in healthy leaves only. Conclusion – Results suggest the potential of using identified HLB biomarkers for rapid differentiation of HLB from zinc deficiency. Copyright © 2010 John Wiley & Sons, Ltd.

Url:
DOI: 10.1002/pca.1271

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ISTEX:CD06B94FA0DE49EA1862FA14B8F0E6AB58E2DA8C

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<unparsedAffiliation>University of Florida, IFAS, Citrus Research and Education Center, Lake Alfred, FL</unparsedAffiliation>
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<keyword xml:id="kwd1">Huanglongbing</keyword>
<keyword xml:id="kwd2">metabolomics</keyword>
<keyword xml:id="kwd3">biomarker</keyword>
<keyword xml:id="kwd4">GC‐MS</keyword>
<keyword xml:id="kwd5">citrus</keyword>
<keyword xml:id="kwd6">zinc deficiency</keyword>
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<title type="main">Abstract</title>
<p>Introduction – Citrus Huanglongbing (HLB) is considered the most destructive citrus disease worldwide. Symptoms‐based detection of HLB is difficult due to similarities with zinc deficiency.</p>
<p>Objective – To find metabolic differences between leaves from HLB‐infected, zinc‐deficient, and healthy ‘Valencia’ orange trees by using GC‐MS based metabolomics.</p>
<p>Methodology – Analysis based on GC‐MS methods for untargeted metabolite analysis of citrus leaves was developed and optimized. Sample extracts from healthy, zinc deficient, or HLB‐infected sweet orange leaves were submitted to headspace solid phase micro‐extraction (SPME) and derivatization treatments prior to GC‐MS analysis.</p>
<p>Results – Principal components analysis achieved correct classification of all the derivatized liquid extracts. Analysis of variance revealed 6 possible biomarkers for HLB, of which 5 were identified as proline, β‐elemene, (‐)trans‐ caryophyllene, and
<i>α</i>
‐humulene. Significant (P < 0.05) differences in oxo‐butanedioic acid, arabitol, and neo‐inositol were exclusively detected in samples from plants with zinc deficiency. Levels of isocaryophyllen,
<i>α</i>
‐selinene,
<i>β</i>
‐selinene, and fructose were significantly (P < 0.05) different in healthy leaves only.</p>
<p>Conclusion – Results suggest the potential of using identified HLB biomarkers for rapid differentiation of HLB from zinc deficiency. Copyright © 2010 John Wiley & Sons, Ltd.</p>
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<title>GC‐MS Analysis of Headspace and Liquid Extracts for Metabolomic Differentiation of Citrus Huanglongbing and Zinc Deficiency in Leaves of ‘Valencia’ Sweet Orange from Commercial Groves</title>
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<title>GC‐MS Analysis for Metabolomic Differentiation of Citrus Huanglongbing</title>
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<title>GC‐MS Analysis of Headspace and Liquid Extracts for Metabolomic Differentiation of Citrus Huanglongbing and Zinc Deficiency in Leaves of ‘Valencia’ Sweet Orange from Commercial Groves</title>
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<name type="personal">
<namePart type="given">Juan Manuel</namePart>
<namePart type="family">Cevallos‐Cevallos</namePart>
<affiliation>University of Florida, IFAS, Citrus Research and Education Center, Lake Alfred, FL</affiliation>
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<roleTerm type="text">author</roleTerm>
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</name>
<name type="personal">
<namePart type="given">Rosalía</namePart>
<namePart type="family">García‐Torres</namePart>
<affiliation>University of Florida, IFAS, Citrus Research and Education Center, Lake Alfred, FL</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
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<name type="personal">
<namePart type="given">Edgardo</namePart>
<namePart type="family">Etxeberria</namePart>
<affiliation>University of Florida, IFAS, Citrus Research and Education Center, Lake Alfred, FL</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
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<name type="personal">
<namePart type="given">José Ignacio</namePart>
<namePart type="family">Reyes‐De‐Corcuera</namePart>
<affiliation>University of Florida, IFAS, Citrus Research and Education Center, Lake Alfred, FL</affiliation>
<description>Correspondence: Reyes‐De‐Corcuera, 700 Experiment Station Rd., Lake Alfred, FL 33850. Phone: 863‐956‐1151 x 1344, Fax: 863‐956‐4631</description>
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<dateIssued encoding="w3cdtf">2011-05</dateIssued>
<dateCaptured encoding="w3cdtf">2010-03-25</dateCaptured>
<dateValid encoding="w3cdtf">2010-06-20</dateValid>
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<abstract lang="en">Introduction – Citrus Huanglongbing (HLB) is considered the most destructive citrus disease worldwide. Symptoms‐based detection of HLB is difficult due to similarities with zinc deficiency. Objective – To find metabolic differences between leaves from HLB‐infected, zinc‐deficient, and healthy ‘Valencia’ orange trees by using GC‐MS based metabolomics. Methodology – Analysis based on GC‐MS methods for untargeted metabolite analysis of citrus leaves was developed and optimized. Sample extracts from healthy, zinc deficient, or HLB‐infected sweet orange leaves were submitted to headspace solid phase micro‐extraction (SPME) and derivatization treatments prior to GC‐MS analysis. Results – Principal components analysis achieved correct classification of all the derivatized liquid extracts. Analysis of variance revealed 6 possible biomarkers for HLB, of which 5 were identified as proline, β‐elemene, (‐)trans‐ caryophyllene, and α‐humulene. Significant (P < 0.05) differences in oxo‐butanedioic acid, arabitol, and neo‐inositol were exclusively detected in samples from plants with zinc deficiency. Levels of isocaryophyllen, α‐selinene, β‐selinene, and fructose were significantly (P < 0.05) different in healthy leaves only. Conclusion – Results suggest the potential of using identified HLB biomarkers for rapid differentiation of HLB from zinc deficiency. Copyright © 2010 John Wiley & Sons, Ltd.</abstract>
<subject lang="en">
<genre>keywords</genre>
<topic>Huanglongbing</topic>
<topic>metabolomics</topic>
<topic>biomarker</topic>
<topic>GC‐MS</topic>
<topic>citrus</topic>
<topic>zinc deficiency</topic>
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<title>Phytochemical Analysis</title>
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<title>Phytochem. Anal.</title>
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<subject>
<genre>article-category</genre>
<topic>Research Article</topic>
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<identifier type="ISSN">0958-0344</identifier>
<identifier type="eISSN">1099-1565</identifier>
<identifier type="DOI">10.1002/(ISSN)1099-1565</identifier>
<identifier type="PublisherID">PCA</identifier>
<part>
<date>2011</date>
<detail type="volume">
<caption>vol.</caption>
<number>22</number>
</detail>
<detail type="issue">
<caption>no.</caption>
<number>3</number>
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<extent unit="pages">
<start>236</start>
<end>246</end>
<total>11</total>
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<identifier type="DOI">10.1002/pca.1271</identifier>
<identifier type="ArticleID">PCA1271</identifier>
<accessCondition type="use and reproduction" contentType="copyright">Copyright © 2010 John Wiley & Sons, Ltd.</accessCondition>
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